RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PHF20L1A8MW92 1017 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 KIAA0391O15091 583 aaKnown RBP13.71□□□□□ -0.21
RNF43-201ENST00000407977 SLC4A1P02730 911 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 CYTH1Q15438 398 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 PIGOQ8TEQ8 1089 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 C1orf54Q8WWF1 131 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 A0A1B0GW55 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ENO4A6NNW6 628 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L2P0CJ85 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L3P0CJ86 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L4P0CJ87 422 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L5P0CJ88 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L6P0CJ89 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4L7P0CJ90 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 VHLP40337 213 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 USP11P51784 963 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 MAPK6Q16659 721 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 TC2NQ8N9U0 490 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ERP27Q96DN0 273 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 DUX4Q9UBX2 424 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 OSBPP22059 807 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 STX3Q13277 289 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 PATL1Q86TB9 770 aaKnown RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 ACAP3Q96P50 834 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 ASCC2Q9H1I8 757 aaPredicted RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 TOPORSQ9NS56 1045 aaPredicted RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 OLA1Q9NTK5 396 aaKnown RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 USP6P35125 1406 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 ENO1P06733 434 aaKnown RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 TMED10P49755 219 aaKnown RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 KDSRQ06136 332 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.22
RNF43-201ENST00000407977 ZNF555Q8NEP9 628 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 STK33Q9BYT3 514 aa13.71□□□□□ -0.22
RNF43-201ENST00000407977 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 RWDD4Q6NW29 188 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.221e-7■■■□□ 15.6
RNF43-201ENST00000407977 DDX5P17844 614 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 CDC27P30260 824 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 DEFA1P59665 94 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 DEFA3P59666 94 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 ADRM1Q16186 407 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 KDM7AQ6ZMT4 941 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 MRPL1Q9BYD6 325 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 ZFATQ9P243 1243 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 GDF11O95390 407 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 HSPA1AP0DMV8 641 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 HSPA1BP0DMV9 641 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 RHPN2Q8IUC4 686 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 EME1Q96AY2 570 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 ANKRD27Q96NW4 1050 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 CHP1Q99653 195 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 IRX2Q9BZI1 471 aaPredicted RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 RHOBTB3O94955 611 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 S100A5P33763 92 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 ACTR2P61160 394 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 WDR93Q6P2C0 686 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
RNF43-201ENST00000407977 ZIM3Q96PE6 472 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 C2orf40Q9H1Z8 148 aa13.7□□□□□ -0.22
RNF43-201ENST00000407977 MAGEA13PA6NCF6 341 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 ANGPT2O15123 496 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 SERPINB3P29508 390 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 OSTNP61366 133 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 NAB2Q15742 525 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 ADCK1Q86TW2 530 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 DTX3LQ8TDB6 740 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 POTECB2RU33 542 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 ZNF185O15231 689 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 UGP2Q16851 508 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 LRRC31Q6UY01 552 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 PASD1Q8IV76 773 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 SYN2Q92777 582 aaPredicted RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 IFT43Q96FT9 208 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 HIC2Q96JB3 615 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 IL1RAPL1Q9NZN1 696 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 ALDH18A1P54886 795 aaKnown RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 EXOSC10Q01780 885 aaKnown RBP13.69□□□□□ -0.22
RNF43-201ENST00000407977 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
RNF43-201ENST00000407977 DPYDQ12882 1025 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms