RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-202ENST00000393158 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-202ENST00000393158 DNAJB3Q8WWF6 145 aa11.79□□□□□ -0.52
PDGFD-202ENST00000393158 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
PDGFD-202ENST00000393158 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
PDGFD-202ENST00000393158 SENP6Q9GZR1 1112 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-202ENST00000393158 TMEM117Q9H0C3 514 aa11.79□□□□□ -0.52
PDGFD-202ENST00000393158 KCND1Q9NSA2 647 aa11.79□□□□□ -0.52
PDGFD-202ENST00000393158 CAPN11Q9UMQ6 739 aa11.79□□□□□ -0.52
PDGFD-202ENST00000393158 USP27XA6NNY8 438 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 RARBP10826 455 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 ENPEPQ07075 957 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 KIZQ2M2Z5 673 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 TCTN1Q2MV58 587 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 TCP11Q8WWU5 503 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 REXO2Q9Y3B8 237 aaKnown RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 SCP2P22307 547 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 DNM2P50570 870 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 UBXN1Q04323 297 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 MTF1Q14872 753 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 FAM186BQ8IYM0 893 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 KIAA1524Q8TCG1 905 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 OGDHLQ9ULD0 1010 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 A0A1W2PQ45 241 aaPredicted RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 A0A1W2PQJ5 194 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 A0A1W2PQY0 241 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 GTPBP10A4D1E9 387 aaKnown RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 N4BP3O15049 544 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 GNA14O95837 355 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 FMO5P49326 533 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 CPB2Q96IY4 423 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 NLRP4Q96MN2 994 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 CDT1Q9H211 546 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 ABHD10Q9NUJ1 306 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
PDGFD-202ENST00000393158 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 TRIM17Q9Y577 477 aa11.78□□□□□ -0.52
PDGFD-202ENST00000393158 K7ERI5 159 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 ZNF263O14978 683 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 CETN3O15182 167 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 ABL1P00519 1130 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 C4BPAP04003 597 aaKnown RBP11.77□□□□□ -0.52
PDGFD-202ENST00000393158 SMTNP53814 917 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 ENOX2Q16206 610 aaKnown RBP11.77□□□□□ -0.52
PDGFD-202ENST00000393158 GJB7Q6PEY0 223 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 EFCAB13Q8IY85 973 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 METTL13Q8N6R0 699 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 TNFSF13BQ9Y275 285 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.52
PDGFD-202ENST00000393158 COL4A4P53420 1690 aaPredicted RBP11.77□□□□□ -0.52
PDGFD-202ENST00000393158 RRN3P2A6NIE6 340 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 CD4P01730 458 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
PDGFD-202ENST00000393158 ACOT2P49753 483 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 PRMT2P55345 433 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 SNX17Q15036 470 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 ZNF333Q96JL9 665 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.53
PDGFD-202ENST00000393158 TOM1L1O75674 476 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 PRKCBP05771 671 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 COL6A1P12109 1028 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 RAD9BQ6WBX8 426 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 RAET1EQ8TD07 263 aa11.77□□□□□ -0.53
PDGFD-202ENST00000393158 ARMCX3Q9UH62 379 aaPredicted RBP11.77□□□□□ -0.53
PDGFD-202ENST00000393158 PATJQ8NI35 1801 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 ASAP2O43150 1006 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 EXTL3O43909 919 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 B4GALT4O60513 344 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 EFNA5P52803 228 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 FAM26DQ5JW98 314 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
PDGFD-202ENST00000393158 ZNF410Q86VK4 478 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 OR5B17Q8NGF7 314 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 TSG101Q99816 390 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 EIF2AQ9BY44 585 aaKnown RBP11.76□□□□□ -0.53
PDGFD-202ENST00000393158 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDGFD-202ENST00000393158 PLCB1Q9NQ66 1216 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 FBXL5Q9UKA1 691 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 PLEKP08567 350 aaPredicted RBP11.76□□□□□ -0.53
PDGFD-202ENST00000393158 KIF22Q14807 665 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 PSMD6Q15008 389 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 FAM228AQ86W67 206 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 GPD1LQ8N335 351 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 OSMRQ99650 979 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 CHP1Q99653 195 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 AP5M1Q9H0R1 490 aa11.76□□□□□ -0.53
PDGFD-202ENST00000393158 AGO3Q9H9G7 860 aaKnown RBP11.76□□□□□ -0.53
PDGFD-202ENST00000393158 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms