RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 GADL1Q6ZQY3 521 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 LRRC57Q8N9N7 239 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TPCN2Q8NHX9 752 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 CTNNBL1Q8WYA6 563 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 BSNDQ8WZ55 320 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 AGPAT1Q99943 283 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 UBE2TQ9NPD8 197 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 NRBP2Q9NSY0 501 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 BTBD7Q9P203 1132 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SUCLA2Q9P2R7 463 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 DIS3Q9Y2L1 958 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 IGF2BP3O00425 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 FTCDO95954 541 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 ADSSP30520 456 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 NAMPTP43490 491 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 GALCP54803 685 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 HADHBP55084 474 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 CYP24A1Q07973 514 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 STRN3Q13033 797 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 PPIL2Q13356 520 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 CASP8Q14790 479 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 CYFIP1Q7L576 1253 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 ENOSF1Q7L5Y1 443 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 CBWD2Q8IUF1 395 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 PLEKHO2Q8TD55 490 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 AFAP1L1Q8TED9 768 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 FAM167AQ96KS9 214 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 SZT2Q5T011 3432 aa11.32□□□□□ -0.6
POLR2J3-201ENST00000379340 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 FOXN3O00409 490 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 EXTL3O43909 919 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 CLSTN1O94985 981 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 OSBPP22059 807 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 UBA1P22314 1058 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 TNNC1P63316 161 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 CLUL1Q15846 466 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 SLC39A4Q6P5W5 647 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 CCNI2Q6ZMN8 369 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 PEX26Q7Z412 305 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 ARHGEF19Q8IW93 802 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 ACTRT1Q8TDG2 376 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 BICD1Q96G01 975 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 PORCNQ9H237 461 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 ELP3Q9H9T3 547 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 STIM2Q9P246 746 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
POLR2J3-201ENST00000379340 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 GOLGA8IPA6NC78 632 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 GOLGA8JA6NMD2 632 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 GAS2O43903 313 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 GZMAP12544 262 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 OAS2P29728 719 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 CXCR5P32302 372 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 ARL2P36404 184 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 LIG4P49917 911 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SP2Q02086 613 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SP4Q02446 784 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 METTL7BQ6UX53 244 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 TRMT1LQ7Z2T5 733 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SHC3Q92529 594 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
POLR2J3-201ENST00000379340 KIFC3Q9BVG8 833 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms