RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 KRT3P12035 628 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 CASP7P55210 303 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 TMEM132DQ14C87 1099 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 C9orf131Q5VYM1 1079 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 PLA2G4FQ68DD2 849 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 FBXO28Q9NVF7 368 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 BAIAP2L1Q9UHR4 511 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 POLRMTO00411 1230 aaKnown RBP19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 RTN2O75298 545 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 MYLK4Q86YV6 388 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 AFG1LQ8WV93 481 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 TMX2Q9Y320 296 aa19.03■□□□□ 0.64
CLSTN1-202ENST00000377298 CYP26A1O43174 497 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 RARBP10826 455 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 NNTQ13423 1086 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 ARHGAP23Q9P227 1491 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 IL18RAPO95256 599 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 APOEP02649 317 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 SPOPLQ6IQ16 392 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 PHLDB3Q6NSJ2 640 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 VPS33BQ9H267 617 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 C17orf75Q9HAS0 396 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 SAYSD1Q9NPB0 183 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 GAS2O43903 313 aaKnown RBP19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 ZNF189O75820 626 aaPredicted RBP19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 CHRNA3P32297 505 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 ADCY1Q08828 1119 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 CASP8Q14790 479 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 JADE1Q6IE81 842 aa19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 PRDM5Q9NQX1 630 aaPredicted RBP19.02■□□□□ 0.64
CLSTN1-202ENST00000377298 CREB3O43889 395 aa19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 MYBP10242 640 aa19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 BCAR1P56945 870 aa19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 SKIV2LQ15477 1246 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 MTIF3Q9H2K0 278 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.63
CLSTN1-202ENST00000377298 EVI5O60447 810 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 FMR1Q06787 632 aaKnown RBP eCLIP19.01■□□□□ 0.631e-6■■■■□ 23.7
CLSTN1-202ENST00000377298 NCOA4Q13772 614 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 KLC3Q6P597 504 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 ABCB6Q9NP58 842 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 CAPN7Q9Y6W3 813 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 ITIH6Q6UXX5 1313 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 ZFXP17010 805 aaPredicted RBP19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 SH2D4BQ5SQS7 431 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 BTBD8Q5XKL5 378 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 WDR35Q9P2L0 1181 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 NOVA2Q9UNW9 492 aaKnown RBP19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 TTI1O43156 1089 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 CD4P01730 458 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 CYP2C9P11712 490 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 DCLK2Q8N568 766 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 APPL2Q8NEU8 664 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 H3BRJ5 948 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 SRGAP2O75044 1071 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 CPT1AP50416 773 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 FSD1LQ9BXM9 530 aa19.01■□□□□ 0.63
CLSTN1-202ENST00000377298 SSU72P8A0A1W2PR75 194 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 MSH4O15457 936 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 ACSL3O95573 720 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 RALAP11233 206 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 SLC1A1P43005 524 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 KIAA1755Q5JYT7 1200 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 NOP9Q86U38 636 aaKnown RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 CATSPER3Q86XQ3 398 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 KSR1Q8IVT5 923 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 PIDD1Q9HB75 910 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 SNX9Q9Y5X1 595 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 HMGB1P1B2RPK0 211 aaPredicted RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 UBE2Q2LH0YL09 131 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 GCLCP48506 637 aaPredicted RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 CDK17Q00537 523 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 ATF7IP2Q5U623 682 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 HEATR6Q6AI08 1181 aaKnown RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 EFCAB12Q6NXP0 572 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 SLC38A7Q9NVC3 462 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 RPS6KA5O75582 802 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 TERF2Q15554 542 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 CDKL3Q8IVW4 592 aaPredicted RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 TTC25Q96NG3 672 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 CTSHP09668 335 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 MUTP22033 750 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 PAPOLAP51003 745 aaKnown RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 CLNS1AP54105 237 aaKnown RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 TAF1BQ53T94 588 aaPredicted RBP19■□□□□ 0.63
CLSTN1-202ENST00000377298 C18orf8Q96DM3 657 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 MAGEB5Q9BZ81 275 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 BAG5Q9UL15 447 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 FAN1Q9Y2M0 1017 aa19■□□□□ 0.63
CLSTN1-202ENST00000377298 CYP11B2P19099 503 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 CA4P22748 312 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 DBN1Q16643 649 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 SYT2Q8N9I0 419 aaPredicted RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 MROH8Q9H579 483 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms