RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PCMTD2Q9NV79 361 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ASB3Q9Y575 518 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 MYH7BA7E2Y1 1941 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DDX39AO00148 427 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 PDLIM1O00151 329 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 EML1O00423 815 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 KIAA0391O15091 583 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TMEM253P0C7T8 217 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 MAGEA10P43363 369 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 JAM2P57087 298 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 MYL7Q01449 175 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 KLRC3Q07444 240 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CALCOCO2Q13137 446 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DOK7Q18PE1 504 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ODR4Q5SWX8 454 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 HYIQ5T013 277 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SEL1L2Q5TEA6 688 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SLFN13Q68D06 897 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SEPT14Q6ZU15 432 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TLCD1Q96CP7 247 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF317Q96PQ6 595 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 EIF2AK1Q9BQI3 630 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DDX23Q9BUQ8 820 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 STK33Q9BYT3 514 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 NSRP1Q9H0G5 558 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 INTS2Q9H0H0 1204 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CARD9Q9H257 536 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ZDHHC18Q9NUE0 388 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CTNNAL1Q9UBT7 734 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ASIC3Q9UHC3 531 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SLC12A4Q9UP95 1085 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 A0A0A6YYK5 440 aaPredicted RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ANKRD63C9JTQ0 380 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 HLA-DOAP06340 250 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 PAEPP09466 180 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 COMTP21964 271 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 POU5F1Q01860 360 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 NFIAQ12857 509 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TNIP1Q15025 636 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ZRSR2Q15696 482 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 FOXR2Q6PJQ5 311 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 C1orf54Q8WWF1 131 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 KLHL29Q96CT2 875 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TAOK3Q9H2K8 898 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 EPB41L4BQ9H329 900 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 AGAP1Q9UPQ3 857 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 A8MUI8 341 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TISP43B9A030 160 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 MSH4O15457 936 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 RPS6KA4O75676 772 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 GDF11O95390 407 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 CFBP00751 764 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 PDHA1P08559 390 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 SNHG28P0DPA3 235 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ZBTB48P10074 688 aaPredicted RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 DLATP10515 647 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 NQO1P15559 274 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 MMP13P45452 471 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 GCLMP48507 274 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ANO7Q6IWH7 933 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 RINT1Q6NUQ1 792 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TTC27Q6P3X3 843 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ZDHHC24Q6UX98 284 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TAOK1Q7L7X3 1001 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 PRELID2Q8N945 189 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ATXN2LQ8WWM7 1075 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ARHGEF2Q92974 986 aaKnown RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 GJD4Q96KN9 370 aaPredicted RBP8.82□□□□□ -1
CDC42SE1-201ENST00000357235 FAM118BQ9BPY3 351 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 PHACTR1Q9C0D0 580 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 APEX2Q9UBZ4 518 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 POLLQ9UGP5 575 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 ZBTB21Q9ULJ3 1066 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 RPTORQ8N122 1335 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 SCN7AQ01118 1682 aa8.82□□□□□ -1
CDC42SE1-201ENST00000357235 TMEM120BA0PK00 339 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ANKRD62A6NC57 917 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 MEIS2O14770 477 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 TPD52L2O43399 206 aaKnown RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PYGMP11217 842 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ALDH1B1P30837 517 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ATP11AP98196 1134 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ZFPM1Q8IX07 1006 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 OPTNQ96CV9 577 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 MRRFQ96E11 262 aaKnown RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 FAM163AQ96GL9 167 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-201ENST00000357235 DYDC2Q96IM9 177 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ADAM7Q9H2U9 754 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ECT2Q9H8V3 914 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 ZWILCHQ9H900 591 aa8.81□□□□□ -1
CDC42SE1-201ENST00000357235 PARVGQ9HBI0 331 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms