RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
PTBP1-201ENST00000349038 ETNK2Q9NVF9 386 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 STOML1Q9UBI4 398 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 ALG6Q9Y672 507 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.18
PTBP1-201ENST00000349038 MAST2Q6P0Q8 1798 aa16.21■□□□□ 0.18
PTBP1-201ENST00000349038 ZBED4O75132 1171 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 USP1O94782 785 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 SPATA31D3P0C874 917 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 TRIM49P0CI25 452 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 TRIM49CP0CI26 452 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 PRDX5P30044 214 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 PTENP60484 403 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 CGB2Q6NT52 195 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 SPATA31D4Q6ZUB0 917 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 REXO1Q8N1G1 1221 aaKnown RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 CLIC5Q9NZA1 410 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 ARMCX1Q9P291 453 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 RGS17Q9UGC6 210 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 GYG2O15488 501 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 BTKQ06187 659 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 GALNTL6Q49A17 601 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 SEL1L2Q5TEA6 688 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 CLEC10AQ8IUN9 316 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 ARL10Q8N8L6 244 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 EIF1ADQ8N9N8 165 aaKnown RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 MMADHCQ9H3L0 296 aaPredicted RBP16.2■□□□□ 0.18
PTBP1-201ENST00000349038 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 CLDN3O15551 220 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 USP46P62068 366 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■■■ 50.8
PTBP1-201ENST00000349038 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 C6orf50Q9HD87 102 aa16.2■□□□□ 0.18
PTBP1-201ENST00000349038 MAPK13O15264 365 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 PON1P27169 355 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 CYP2J2P51589 502 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 PRELID2Q8N945 189 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 FAM161BQ96MY7 647 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 MTMR9Q96QG7 549 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 ANKIB1Q9P2G1 1089 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 GCNT3O95395 438 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 GNAZP19086 355 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 RASA1P20936 1047 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 PIK3CAP42336 1068 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 IL9RQ01113 521 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 ARHGEF18Q6ZSZ5 1173 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 PROM2Q8N271 834 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 CEP70Q8NHQ1 597 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 RAD54LQ92698 747 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 CARD9Q9H257 536 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
PTBP1-201ENST00000349038 BHMG1C9JSJ3 638 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 CETPP11597 493 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 ASAP3Q8TDY4 903 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 SUCLA2Q9P2R7 463 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 NAALADL1Q9UQQ1 740 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 LRRC42Q9Y546 428 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 POTEFA5A3E0 1075 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 GOLGA8SH3BPF8 625 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 GOLGA8MH3BSY2 632 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 CES2O00748 559 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 HNRNPCP07910 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 NUDT17P0C025 328 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 VHLP40337 213 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 POTEGQ6S5H5 508 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 ASRGL1Q7L266 308 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 CKAP2Q8WWK9 683 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 FBXO6Q9NRD1 293 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■□□□ 11.9
PTBP1-201ENST00000349038 BZW2Q9Y6E2 419 aaKnown RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 MAP3K7O43318 606 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 PYGMP11217 842 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 KRT17Q04695 432 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 DRAP1Q14919 205 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-201ENST00000349038 TRIM59Q8IWR1 403 aa16.18■□□□□ 0.18
PTBP1-201ENST00000349038 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms