RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PTENP60484 403 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 SKOR1P84550 965 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 FMO1Q01740 532 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 CYP24A1Q07973 514 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 ZNF211Q13398 564 aaPredicted RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 KCTD19Q17RG1 926 aaPredicted RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 NAA35Q5VZE5 725 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 TAS1R2Q8TE23 839 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 POMGNT1Q8WZA1 660 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 A1CFQ9NQ94 594 aaKnown RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 TMOD4Q9NZQ9 345 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 SLC9A2Q9UBY0 812 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 PLAAQ9Y263 795 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 C19orf81C9J6K1 198 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 DAPK3O43293 454 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 DGAT1O75907 488 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 MMEP08473 750 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 GTF2H1P32780 548 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 IRAK1P51617 712 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 RTP1P59025 263 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 PRKCEQ02156 737 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 ABHD15Q6UXT9 468 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 CATSPERGQ6ZRH7 1159 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 TAS1R3Q7RTX0 852 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 SH2D3CQ8N5H7 860 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 NT5C1BQ96P26 610 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 NAP1L3Q99457 506 aaPredicted RBP15.69■□□□□ 0.1
TPM3-206ENST00000330188 CAPS2Q9BXY5 557 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 ACAD9Q9H845 621 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 ERVK-5Q9HDB9 667 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 RAB20Q9NX57 234 aa15.69■□□□□ 0.1
TPM3-206ENST00000330188 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
TPM3-206ENST00000330188 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
TPM3-206ENST00000330188 MIF4GDA9UHW6 222 aaKnown RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 MTA2O94776 668 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 HSD17B3P37058 310 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 ACTR2P61160 394 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 SP4Q02446 784 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 UAP1Q16222 522 aaPredicted RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 ANGEL2Q5VTE6 544 aaKnown RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 GPD1LQ8N335 351 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 KRT35Q92764 455 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 LRRC45Q96CN5 670 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 CDHR1Q96JP9 859 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 TEX13BQ9BXU2 312 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 CYP26B1Q9NR63 512 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 ATMINO43313 823 aaPredicted RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 CYP11B1P15538 503 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 GARTP22102 1010 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 KCTD16Q68DU8 428 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 LRIG3Q6UXM1 1119 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 SV2AQ7L0J3 742 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 APOBEC3FQ8IUX4 373 aaKnown RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 C1orf131Q8NDD1 294 aaKnown RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 ZSWIM1Q9BR11 485 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 ARHGAP28Q9P2N2 729 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 CHORDC1Q9UHD1 332 aaPredicted RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 UTP11Q9Y3A2 253 aaKnown RBP15.68■□□□□ 0.1
TPM3-206ENST00000330188 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
TPM3-206ENST00000330188 TMEM110-MUSTN1A8MSY1 372 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 SPATA31C2B4DYI2 1134 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 H0YGN5 161 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 HNRNPDLO14979 420 aaKnown RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 SORBS3O60504 671 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 STAM2O75886 525 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 COPB2P35606 906 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 FLT3P36888 993 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 MARCKSL1P49006 195 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 GNGT1P63211 74 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 ENPEPQ07075 957 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 MESDQ14696 234 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 CLUL1Q15846 466 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 PPP2R5EQ16537 467 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 AADACL2Q6P093 401 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 ADAT2Q7Z6V5 191 aaKnown RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 UBL4BQ8N7F7 174 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 TATDN2Q93075 761 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 ELMO3Q96BJ8 720 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 TRIM51Q9BSJ1 452 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 POLR3FQ9H1D9 316 aaPredicted RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
TPM3-206ENST00000330188 NFS1Q9Y697 457 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 SYNGAP1Q96PV0 1343 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 GOLGA6L10A0A0M3HER8 536 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 CYP1A2P05177 515 aa15.67■□□□□ 0.1
TPM3-206ENST00000330188 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms