RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 NRBF2Q96F24 287 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 STRIP2Q9ULQ0 834 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 H3BRJ5 948 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 BBOX1O75936 387 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 DRP2Q13474 957 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 TRPM8Q7Z2W7 1104 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 PRPF38AQ8NAV1 312 aaKnown RBP16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 RUBCNQ92622 972 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 LZTS1Q9Y250 596 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 RTN2O75298 545 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 PMLP29590 882 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 HACD3Q9P035 362 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 IGF2BP3O00425 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 SUPT3HO75486 399 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 SLFN12LQ6IEE8 588 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 PSD3Q9NYI0 1048 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 CALB1P05937 261 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 SCP2P22307 547 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 ERP27Q96DN0 273 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 CEP19Q96LK0 163 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 UBTFL6P0CB48 400 aaPredicted RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 AKR1B1P15121 316 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 GPC3P51654 580 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 OLFML2BQ68BL8 750 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 KLF6Q99612 283 aaPredicted RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 UCHL3P15374 230 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 SWSAP1Q6NVH7 229 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 ANGPTL8Q6UXH0 198 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 ATP11CQ8NB49 1132 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 RMDN3Q96TC7 470 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 REEP2Q9BRK0 252 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 POLR3FQ9H1D9 316 aaPredicted RBP16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 L3MBTL1Q9Y468 752 aa16.26■□□□□ 0.19
SHROOM4-201ENST00000289292 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 PITPNM2Q9BZ72 1349 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 DPP9Q86TI2 863 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 CCDC90BQ9GZT6 254 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 OLA1Q9NTK5 396 aaKnown RBP16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 ZNF507Q8TCN5 953 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 TMEM117Q9H0C3 514 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 SCHIP1Q9P0W5 487 aaPredicted RBP16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 NEMP1O14524 444 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 KCNJ1P48048 391 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 JAK3P52333 1124 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 HIF1AQ16665 826 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM160B2Q86V87 743 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 NBPF3Q9H094 633 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 GABBR1Q9UBS5 961 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 GGPS1O95749 300 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 TAC1P20366 129 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 HSD17B3P37058 310 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 KRT39Q6A163 491 aa16.25■□□□□ 0.19
SHROOM4-201ENST00000289292 TMEM120BA0PK00 339 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 H2AFXP16104 143 aaPredicted RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 KLRC1P26715 233 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 ZC2HC1CQ53FD0 456 aaPredicted RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 SLC30A9Q6PML9 568 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 KIRREL3Q8IZU9 778 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 TTC13Q8NBP0 860 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 OLFM3Q96PB7 478 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 NME3Q13232 169 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 NAB2Q15742 525 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 METTL23Q86XA0 190 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 ZNF568Q3ZCX4 644 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 MTRQ99707 1265 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 MID2Q9UJV3 735 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 KPNA7A9QM74 516 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 KCNA3P22001 575 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 LRRC8EQ6NSJ5 796 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 JAMLQ86YT9 394 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 ING2Q9H160 280 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 GOLGA8CPA6NN73 597 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 LDHAP00338 332 aaKnown RBP16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 AGBL2Q5U5Z8 902 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 PPP1R18Q6NYC8 613 aa16.24■□□□□ 0.19
SHROOM4-201ENST00000289292 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms