RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CHORDC1Q9UHD1 332 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 CTIFO43310 598 aaKnown RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ARHGDIAP52565 204 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 TTC13Q8NBP0 860 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ABTB1Q969K4 478 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 SERPINI1Q99574 410 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ZBTB18Q99592 522 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 MTMR4Q9NYA4 1195 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 TRIM10Q9UDY6 481 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ZFP69BQ9UJL9 534 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 NDUFB10O96000 172 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ARSEP51690 589 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ALX1Q15699 326 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 COBLL1Q53SF7 1204 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ARL8AQ96BM9 186 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 BRAFP15056 766 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 FMR1Q06787 632 aaKnown RBP eCLIP19.81■□□□□ 0.765e-7■■□□□ 11.7
SMARCC1-201ENST00000254480 UPF3AQ9H1J1 476 aaKnown RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 L3MBTL1Q9Y468 752 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 CFAP69A5D8W1 941 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 FASTKD1Q53R41 847 aaKnown RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 IZUMO3Q5VZ72 239 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 RGS9BPQ6ZS82 235 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 TTC8Q8TAM2 541 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.81■□□□□ 0.762e-7■■□□□ 11.9
SMARCC1-201ENST00000254480 TRPV6Q9H1D0 765 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 SMARCAL1Q9NZC9 954 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 NRKQ7Z2Y5 1582 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 VCPP55072 806 aaKnown RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 ESRRGP62508 458 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 RBBP7Q16576 425 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 ANGEL2Q5VTE6 544 aaKnown RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 CDC42EP5Q6NZY7 148 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 CC2D1AQ6P1N0 951 aaPredicted RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 N4BP2L2Q92802 583 aaPredicted RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 REEP2Q9BRK0 252 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 HSPBP1Q9NZL4 362 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 ORC4O43929 436 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 CYP2B6P20813 491 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 KRT17Q04695 432 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 GUF1Q8N442 669 aaKnown RBP19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 RAET1EQ8TD07 263 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 EXOC4Q96A65 974 aa19.81■□□□□ 0.76
SMARCC1-201ENST00000254480 ADRA2BP18089 450 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 CYP26B1Q9NR63 512 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 DIS3Q9Y2L1 958 aaKnown RBP19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 DNAJC6O75061 913 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 SCP2P22307 547 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 USP11P51784 963 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 HNRNPH2P55795 449 aaKnown RBP19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 PRR5LQ6MZQ0 368 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 PDXDC1Q6P996 788 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 BTBD6Q96KE9 485 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 AGPAT1Q99943 283 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 ADA2Q9NZK5 511 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 FBXL5Q9UKA1 691 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 ZNF609O15014 1411 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 SULT1E1P49888 294 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 NLRP11P59045 1033 aaKnown RBP19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 RHOT1Q8IXI2 618 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 LRRC71Q8N4P6 559 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 WDR24Q96S15 920 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 ABCC3O15438 1527 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 TNS3Q68CZ2 1445 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 EPHA7Q15375 998 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 DDIASQ8IXT1 998 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 THEMIS2Q5TEJ8 643 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 USP49Q70CQ1 688 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 SH3KBP1Q96B97 665 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 CAPN11Q9UMQ6 739 aa19.8■□□□□ 0.76
SMARCC1-201ENST00000254480 EYA4O95677 639 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 CDR2LQ86X02 465 aaPredicted RBP19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 TGS1Q96RS0 853 aaKnown RBP19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 TMEM39BQ9GZU3 492 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 KCNN4O15554 427 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 IRF1P10914 325 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 SMARCA1P28370 1054 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 NNMTP40261 264 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 DMTNQ08495 405 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 ACAD11Q709F0 780 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 SCG3Q8WXD2 468 aaKnown RBP19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 ADAM21Q9UKJ8 722 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 ANGPTL2Q9UKU9 493 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 SOX11P35716 441 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 KLK7P49862 253 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 PGBD4Q96DM1 585 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 ATMINO43313 823 aaPredicted RBP19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 HERC5Q9UII4 1024 aaKnown RBP19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 OVOS2A0A0G2JMS6 1433 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 OVOS2A0A0J9YW53 1432 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 OVOS2Q6IE36 1432 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 PFDN1O60925 122 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 KRT7P08729 469 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 ZNF543Q08ER8 600 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 C1orf146Q5VVC0 180 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 SGMS1Q86VZ5 419 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 AGPAT5Q9NUQ2 364 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms