RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 AKAP3O75969 853 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 AFPP02771 609 aaKnown RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 CLPPQ16740 277 aaPredicted RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 CFAP58Q5T655 872 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 FRMD5Q7Z6J6 570 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 TAF4BQ92750 862 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 AZIN2Q96A70 460 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 INIPQ9NRY2 104 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 G3V3G9 751 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 RAD51CO43502 376 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 TOM1O60784 492 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 SUPT3HO75486 399 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 GSTT1P30711 240 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CASP4P49662 377 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 KCNJ2P63252 427 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 KCTD19Q17RG1 926 aaPredicted RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 TCERG1LQ5VWI1 586 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 USP38Q8NB14 1042 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CLIP3Q96DZ5 547 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 ATP6V1G3Q96LB4 118 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 AJAP1Q9UKB5 411 aaPredicted RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 A8MUI8 341 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CLIC2O15247 247 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 NQO1P15559 274 aaKnown RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 RPA1P27694 616 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CRKP46108 304 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 KCNA1Q09470 495 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
LITAF-221ENST00000622633 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 SESTD1Q86VW0 696 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 CYP2W1Q8TAV3 490 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 LENG9Q96B70 501 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 PLCB1Q9NQ66 1216 aa13.36□□□□□ -0.27
LITAF-221ENST00000622633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 SLC26A4O43511 780 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 ATP6V1C1P21283 382 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 KLC1Q07866 573 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 CMPK2Q5EBM0 449 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 GKAP1Q5VSY0 366 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 ALKBH5Q6P6C2 394 aaKnown RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 TRIM11Q96F44 468 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 BHMT2Q9H2M3 363 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 IKZF4Q9H2S9 585 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 SLC12A6Q9UHW9 1150 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 RABL2BQ9UNT1 228 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 SPO11Q9Y5K1 396 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 FOCADQ5VW36 1801 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 F5H6K3 240 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 GCNT3O95395 438 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 NR3C1P04150 777 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 STIP1P31948 543 aaKnown RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 CLCN2P51788 898 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 KLRC3Q07444 240 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 EPHA7Q15375 998 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 P3H1Q32P28 736 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 MOXD1Q6UVY6 613 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 SLC30A10Q6XR72 485 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 CD302Q8IX05 232 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
LITAF-221ENST00000622633 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 CIDEBQ9UHD4 219 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 EFR3BQ9Y2G0 817 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
LITAF-221ENST00000622633 TMEM247A6NEH6 219 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms