RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 HOXC13P31276 330 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 AK2P54819 239 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 PLCB4Q15147 1175 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 SPATA31D4Q6ZUB0 917 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 SCUBE3Q8IX30 993 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 SPATA18Q8TC71 538 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 FAM3CQ92520 227 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 EXOC6BQ9Y2D4 811 aa11.77□□□□□ -0.53
AP003900.1-202ENST00000616952 SDK1Q7Z5N4 2213 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 RELNP78509 3460 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 RANBP6O60518 1105 aaKnown RBP11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 CAVIN2O95810 425 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 GALTP07902 379 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 OSBP2Q969R2 916 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 ZC3H10Q96K80 434 aaKnown RBP11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 RPS6KC1Q96S38 1066 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 UBA5Q9GZZ9 404 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 C2orf42Q9NWW7 574 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 DOCK5Q9H7D0 1870 aa11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
AP003900.1-202ENST00000616952 A0A087WV48 116 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 ECI2O75521 394 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 AKAP3O75969 853 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 NTHL1P78549 312 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 MRPS9P82933 396 aaKnown RBP11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 CREB5Q02930 508 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 Q6ZS52 159 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 ZNF598Q86UK7 904 aaKnown RBP11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 GPIHBP1Q8IV16 184 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 ARHGAP45Q92619 1136 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 OSMRQ99650 979 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 SLC6A16Q9GZN6 736 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
AP003900.1-202ENST00000616952 DOPEY1Q5JWR5 2465 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 GSTTP1A0A1W2PQM5 241 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 CAPN9O14815 690 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 STAM2O75886 525 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 SLC11A1P49279 550 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 CFHR1Q03591 330 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 LRRC32Q14392 662 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 ZNF423Q2M1K9 1284 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 KIZQ2M2Z5 673 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 PLK5Q496M5 336 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 MTHFD1LQ6UB35 978 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 RSPH1Q8WYR4 309 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 PPP1R16BQ96T49 567 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 NAPBQ9H115 298 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 NRDE2Q9H7Z3 1164 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 RBM12Q9NTZ6 932 aaKnown RBP11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 KCNK4Q9NYG8 393 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 PIAS3Q9Y6X2 628 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 COL4A2P08572 1712 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
AP003900.1-202ENST00000616952 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 BCLAF3A2AJT9 711 aaKnown RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 F5P12259 2224 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ATP5JP18859 108 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ABCG1P45844 678 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 CRYBB1P53674 252 aaPredicted RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ZNF280BQ86YH2 543 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ADGRF4Q8IZF3 695 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 ITFG1Q8TB96 612 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 SEPT1Q8WYJ6 367 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 APPBP2Q92624 585 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 PLA2G2FQ9BZM2 168 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 TBC1D13Q9NVG8 400 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 SSX2IPQ9Y2D8 614 aa11.73□□□□□ -0.53
AP003900.1-202ENST00000616952 SPAG17Q6Q759 2223 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 FRMPD4Q14CM0 1322 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 CCDC163A0A0D9SF12 145 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 DDX11L8A8MPP1 907 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 M0R2C6 588 aa11.72□□□□□ -0.53
AP003900.1-202ENST00000616952 KHNYNO15037 678 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms