RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SMG8Q8ND04 991 aaKnown RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 URGCPQ8TCY9 931 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 LRRC15Q8TF66 581 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 REEP2Q9BRK0 252 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 CWH43Q9H720 699 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 PARVGQ9HBI0 331 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 TNFSF13BQ9Y275 285 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 COL4A4P53420 1690 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 KIAA1671Q9BY89 1806 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 SFI1A8K8P3 1242 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 B4GALT5O43286 388 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
HDDC2-209ENST00000609477 FAM13AO94988 1023 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 NCKAP1LP55160 1127 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 STRN3Q13033 797 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 TMEM132AQ24JP5 1023 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 LRRC55Q6ZSA7 311 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 IQUBQ8NA54 791 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 TMEM161BQ8NDZ6 487 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 EIF2AQ9BY44 585 aaKnown RBP15.71■□□□□ 0.11
HDDC2-209ENST00000609477 MRPL4Q9BYD3 311 aaKnown RBP15.71■□□□□ 0.11
HDDC2-209ENST00000609477 PDZD7Q9H5P4 517 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 FAM13BQ9NYF5 915 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 PLAGL2Q9UPG8 496 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 LZTS1Q9Y250 596 aa15.71■□□□□ 0.11
HDDC2-209ENST00000609477 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 AMPD3Q01432 767 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 PLCB3Q01970 1234 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 FOXD4L6Q3SYB3 417 aaPredicted RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ADALQ6DHV7 355 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 PDE12Q6L8Q7 609 aaKnown RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 SHC4Q6S5L8 630 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 KCNT2Q6UVM3 1135 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 FOXD4L3Q6VB84 417 aaPredicted RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 MYCT1Q8N699 235 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 COLGALT1Q8NBJ5 622 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 LPPQ93052 612 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ZNF558Q96NG5 402 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
HDDC2-209ENST00000609477 KIFC3Q9BVG8 833 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
HDDC2-209ENST00000609477 SLC16A4O15374 487 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 TRAK2O60296 914 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 NPTXRO95502 500 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 GAP43P17677 238 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 KRT17Q04695 432 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 RNASELQ05823 741 aaKnown RBP15.69■□□□□ 0.1
HDDC2-209ENST00000609477 E2F4Q16254 413 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 NT5DC1Q5TFE4 455 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 RESP18Q5W5W9 173 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 ZPBP2Q6X784 338 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 SPPL3Q8TCT6 385 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 DDX12PQ92771 950 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
HDDC2-209ENST00000609477 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
HDDC2-209ENST00000609477 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 ARL5CA6NH57 179 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 NCK2O43639 380 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 TOM1L1O75674 476 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 FGF18O76093 207 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 ITGB1P05556 798 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 LIG1P18858 919 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 TAS1R3Q7RTX0 852 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 THNSL1Q8IYQ7 743 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 PDILTQ8N807 584 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
HDDC2-209ENST00000609477 PPP2R3CQ969Q6 453 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
HDDC2-209ENST00000609477 TMEM175Q9BSA9 504 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 PANK2Q9BZ23 570 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 NXF3Q9H4D5 531 aaKnown RBP15.68■□□□□ 0.1
HDDC2-209ENST00000609477 PTPRHQ9HD43 1115 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 SPG21Q9NZD8 308 aa15.68■□□□□ 0.1
HDDC2-209ENST00000609477 A0A087X0B3 334 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 MYMKA6NI61 221 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 TTLL13PA6NNM8 815 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 GRM6O15303 877 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 NR1I2O75469 434 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 ALDH2P05091 517 aa15.67■□□□□ 0.1
HDDC2-209ENST00000609477 MCF2P10911 925 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms