RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 IFT74Q96LB3 600 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 CLEC1BQ9P126 229 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 NCOR1O75376 2440 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 A0A1B0GUA9 196 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 VWA3AA6NCI4 1184 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 DDHD2O94830 711 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 EYA4O95677 639 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 GLP2RO95838 553 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 LIG1P18858 919 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 SSTR3P32745 418 aaPredicted RBP19.56■□□□□ 0.72
TPM4-206ENST00000587201 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
TPM4-206ENST00000587201 MAPK6Q16659 721 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 GJD3Q8N144 294 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 KIFAP3Q92845 792 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 MSLNLQ96KJ4 702 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 GAD1Q99259 594 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 FZD8Q9H461 694 aa19.56■□□□□ 0.72
TPM4-206ENST00000587201 NXF3Q9H4D5 531 aaKnown RBP19.56■□□□□ 0.72
TPM4-206ENST00000587201 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 ARL5CA6NH57 179 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 B4GALT3O60512 393 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 ALDH2P05091 517 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 PRKCBP05771 671 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 SRGAP2BP0DMP2 458 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 MLH1P40692 756 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 RBM10P98175 930 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 SMAD2Q15796 467 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 FAM187BQ17R55 369 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 ARL6IP4Q66PJ3 421 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 DDX53Q86TM3 631 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 VPS52Q8N1B4 723 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 MRPL43Q8N983 215 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 BCL7CQ8WUZ0 217 aaPredicted RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 TMEM175Q9BSA9 504 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 MMTAG2Q9BU76 263 aaKnown RBP19.55■□□□□ 0.72
TPM4-206ENST00000587201 CD320Q9NPF0 282 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 FAN1Q9Y2M0 1017 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 GIT1Q9Y2X7 761 aa19.55■□□□□ 0.72
TPM4-206ENST00000587201 C2orf71A6NGG8 1288 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 CXCL14O95715 111 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 AKAP5P24588 427 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 SCNN1GP51170 649 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 COASYQ13057 564 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 PRPF4BQ13523 1007 aaKnown RBP19.54■□□□□ 0.72
TPM4-206ENST00000587201 LLGL2Q6P1M3 1020 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 BRAPQ7Z569 592 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 VN1R2Q8NFZ6 395 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 KIFC3Q9BVG8 833 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 ZBP1Q9H171 429 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 PRKAG3Q9UGI9 489 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 PARP2Q9UGN5 583 aa19.54■□□□□ 0.72
TPM4-206ENST00000587201 ACKR2O00590 384 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 NRP1O14786 923 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 N4BP3O15049 544 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 PDCP20941 246 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 KCNK18Q7Z418 384 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 TMEM87AQ8NBN3 555 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 SMRP1Q8NCR6 262 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 CDK5RAP3Q96JB5 506 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 ZFP42Q96MM3 310 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 CCDC113Q9H0I3 377 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 NT5C3AQ9H0P0 336 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 MIOSQ9NXC5 875 aa19.53■□□□□ 0.72
TPM4-206ENST00000587201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.72
TPM4-206ENST00000587201 TTLL13PA6NNM8 815 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 INPPL1O15357 1258 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 CTSAP10619 480 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 OR1G1P47890 313 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 EFNA5P52803 228 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 ZP2Q05996 745 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 HYIQ5T013 277 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 RINT1Q6NUQ1 792 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 ADHFE1Q8IWW8 467 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 COLGALT2Q8IYK4 626 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 AUTS2Q8WXX7 1259 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 PNMA5Q96PV4 448 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 PLIN2Q99541 437 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 ADPGKQ9BRR6 497 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 PDZD7Q9H5P4 517 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 STK39Q9UEW8 545 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 USP20Q9Y2K6 914 aa19.52■□□□□ 0.72
TPM4-206ENST00000587201 PRG3Q9Y2Y8 225 aaPredicted RBP19.52■□□□□ 0.72
TPM4-206ENST00000587201 CCDC169A6NNP5 214 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 HIP1RO75146 1068 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 NR1I2O75469 434 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 BMP15O95972 392 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 SSBP05455 408 aaKnown RBP eCLIP19.51■□□□□ 0.71
TPM4-206ENST00000587201 PEX3P56589 373 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 KCNC3Q14003 757 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 GIT2Q14161 759 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 TMEM184AQ6ZMB5 413 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 CABP7Q86V35 215 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 KCTD17Q8N5Z5 321 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 KHSRPQ92945 711 aaKnown RBP eCLIP19.51■□□□□ 0.71
TPM4-206ENST00000587201 DRC1Q96MC2 740 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 RPS6KC1Q96S38 1066 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 KLK14Q9P0G3 267 aa19.51■□□□□ 0.71
TPM4-206ENST00000587201 USP15Q9Y4E8 981 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms