RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 ALDH1A2O94788 518 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 HKR1P10072 659 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 PTX3P26022 381 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 CXCR5P32302 372 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 CASRP41180 1078 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 ELLP55199 621 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 ADCY2Q08462 1091 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 PABPC4Q13310 644 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 DOK3Q7L591 496 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 HDGFL2Q7Z4V5 671 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 OR5M3Q8NGP4 307 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 TESQ9UGI8 421 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 HDAC5Q9UQL6 1122 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 TLDC2A0PJX2 215 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 MAFGO15525 162 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 OPHN1O60890 802 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 DNAJC8O75937 253 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 C1RP00736 705 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 BMPR1AP36894 532 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 WNT3AP56704 352 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 MRPL49Q13405 166 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 ZNF460Q14592 562 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 SP5Q6BEB4 398 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 PLXDC1Q8IUK5 500 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 KIAA1958Q8N8K9 716 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 CHST14Q8NCH0 376 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 IL17RAQ96F46 866 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 LRFN3Q9BTN0 628 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 SPATA5L1Q9BVQ7 753 aa6.44□□□□□ -1.38
SMCHD1-207ENST00000581711 PIPSLA2A3N6 862 aa6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 PLA2G5P39877 138 aa6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 FNDC3BQ53EP0 1204 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 DDX53Q86TM3 631 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 UNC5BQ8IZJ1 945 aa6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 PIK3C3Q8NEB9 887 aa6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 NOL10Q9BSC4 688 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-207ENST00000581711 UNC119BA6NIH7 251 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 H7C1D1 291 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 GLRX3O76003 335 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 RNASE9P60153 205 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 TCEA2Q15560 299 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 UNQ6494/PRO21346Q6UXR6 183 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 C7orf31Q8N865 590 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 CPEB3Q8NE35 698 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 PPP1R14CQ8TAE6 165 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 TEX101Q9BY14 249 aa6.42□□□□□ -1.38
SMCHD1-207ENST00000581711 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 OPA1O60313 960 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 PRPF6O94906 941 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 APOL3O95236 402 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 ZNF174Q15697 407 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 KIAA1841Q6NSI8 718 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 TIGD7Q6NT04 549 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 ESRP1Q6NXG1 681 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 PHYKPLQ8IUZ5 450 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 DHX37Q8IY37 1157 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 MYL10Q9BUA6 226 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 ALG13Q9NP73 1137 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
SMCHD1-207ENST00000581711 MYADML2A6NDP7 307 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 ENPP3O14638 875 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 NHLH2Q02577 135 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 ADCY1Q08828 1119 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 ABHD17BQ5VST6 288 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 SDE2Q6IQ49 451 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 ZCCHC8Q6NZY4 707 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 MICALCLQ6ZW33 695 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 GPRIN1Q7Z2K8 1008 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 SYT12Q8IV01 421 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 ADAM2Q99965 735 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 INTS7Q9NVH2 962 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 TMA7Q9Y2S6 64 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-207ENST00000581711 PRR5-ARHGAP8B1AHC4 643 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 DIRC3C9JPN6 131 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 PROB1E7EW31 1015 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 RFPL3O75679 317 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 ESRRBO95718 433 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 DDX6P26196 483 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 IGFALSP35858 605 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 GZMKP49863 264 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 CD69Q07108 199 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 TP53BP2Q13625 1128 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 ASB10Q8WXI3 467 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 TLK1Q9UKI8 766 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 CLCA2Q9UQC9 943 aa6.39□□□□□ -1.39
SMCHD1-207ENST00000581711 FAM83GA6ND36 823 aa6.38□□□□□ -1.39
SMCHD1-207ENST00000581711 ASLP04424 464 aa6.38□□□□□ -1.39
SMCHD1-207ENST00000581711 JMJD7P0C870 316 aa6.38□□□□□ -1.39
SMCHD1-207ENST00000581711 FOXF2Q12947 444 aa6.38□□□□□ -1.39
SMCHD1-207ENST00000581711 PDCD4Q53EL6 469 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-207ENST00000581711 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms