RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 ITGA4P13612 1032 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 GLRA2P23416 452 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 MTHFRP42898 656 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.178e-8■□□□□ 8.3
SMARCE1-213ENST00000578044 HAUS3Q68CZ6 603 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 RNF168Q8IYW5 571 aaPredicted RBP16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 SLC22A17Q8WUG5 538 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 C2orf40Q9H1Z8 148 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 FZD8Q9H461 694 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 DPP7Q9UHL4 492 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 IPPQ9Y573 584 aa16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 POTEMA6NI47 508 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 MEIS3P2A8K0S8 358 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 ARF4P18085 180 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 MCM7P33993 719 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 SLC11A1P49279 550 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 PTPN14Q15678 1187 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 TMEM173Q86WV6 379 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 ASAP3Q8TDY4 903 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 FAM193BQ96PV7 902 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 PRRX2Q99811 253 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 MUTYHQ9UIF7 546 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
SMARCE1-213ENST00000578044 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 NT5C1B-RDH14C9J2C7 533 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 NR1I2O75469 434 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 DDHD2O94830 711 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 SOD2P04179 222 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 CYP11B2P19099 503 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 ZXDAP98168 799 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 C15orf39Q6ZRI6 1047 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 CCDC83Q8IWF9 413 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 PHLPP2Q6ZVD8 1323 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 DENND4AQ7Z401 1863 aa16.07■□□□□ 0.16
SMARCE1-213ENST00000578044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 NRP1O14786 923 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 CSPG5O95196 566 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 PRPHP41219 470 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 NAMPTP43490 491 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 EFNA5P52803 228 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 NUBP1P53384 320 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 SIGLEC14Q08ET2 396 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 ELMSAN1Q6PJG2 1045 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 ZBTB8OSQ8IWT0 167 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 C4orf32Q8N8J7 132 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 POLR3FQ9H1D9 316 aaPredicted RBP16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-213ENST00000578044 B4GALT3O60512 393 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 MED24O75448 989 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 ATP2B1P20020 1258 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 CREMQ03060 361 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 GRIK3Q13003 919 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 RABEP1Q15276 862 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 ATAT1Q5SQI0 421 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 UBALD2Q8IYN6 164 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 GSTCDQ8NEC7 633 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 KIFAP3Q92845 792 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 EIF2AQ9BY44 585 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 TRIM6Q9C030 488 aaPredicted RBP16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 SFXN1Q9H9B4 322 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 C17orf75Q9HAS0 396 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 RAPGEFL1Q9UHV5 662 aa16.05■□□□□ 0.16
SMARCE1-213ENST00000578044 ACKR2O00590 384 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms