RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 CITED4Q96RK1 184 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 PNKPQ96T60 521 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 SETDB2Q96T68 719 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 CHP1Q99653 195 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 TSG101Q99816 390 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 DUSP9Q99956 384 aaKnown RBP6.29□□□□□ -1.4
CTNS-210ENST00000576979 TUBGCP2Q9BSJ2 902 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 PDE11AQ9HCR9 933 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 KBTBD4Q9NVX7 518 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 BARHL2Q9NY43 387 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 STIM2Q9P246 746 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 VPS18Q9P253 973 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 SAR1BQ9Y6B6 198 aa6.29□□□□□ -1.4
CTNS-210ENST00000576979 LY75O60449 1722 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 A0A1W2PQJ5 194 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 B4DLN1 442 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 EIF3CLB5ME19 914 aaKnown RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 H3BQF6 201 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TACC1O75410 805 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 FAM87AP0C7U9 286 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 PLCG1P19174 1290 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 MPSTP25325 297 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 USP14P54578 494 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 HNRNPH2P55795 449 aaKnown RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 VSNL1P62760 191 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 ST5P78524 1137 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 DAB2P98082 770 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 AMPD2Q01433 879 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 PRKCQQ04759 706 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 KIF5AQ12840 1032 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 MEA1Q16626 185 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 AOC3Q16853 763 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 LETM2Q2VYF4 491 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 SLC4A8Q2Y0W8 1093 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 FIGNQ5HY92 759 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 FYB2Q5VWT5 728 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TBC1D9BQ66K14 1250 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 NCAPH2Q6IBW4 605 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TTI2Q6NXR4 508 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 NEK8Q86SG6 692 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 ZNF713Q8N859 430 aaPredicted RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 LINC00116Q8NCU8 138 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 RUBCNQ92622 972 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 DMRTB1Q96MA1 342 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 ALS2CR12Q96Q35 445 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 PLIN2Q99541 437 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 EIF3CQ99613 913 aaKnown RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 C7orf25Q9BPX7 421 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 NOC4LQ9BVI4 516 aaKnown RBP6.28□□□□□ -1.4
CTNS-210ENST00000576979 SPZ1Q9BXG8 430 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 RAB34Q9BZG1 259 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 TMEM60Q9H2L4 133 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 VIPAS39Q9H9C1 493 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 NARFQ9UHQ1 456 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 MAD2L2Q9UI95 211 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 ADAM21Q9UKJ8 722 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 L1RE1Q9UN81 338 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 STX8Q9UNK0 236 aa6.28□□□□□ -1.4
CTNS-210ENST00000576979 SPATA31A5Q5VU36 1347 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 SPATA31A7Q8IWB4 1347 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 LOXHD1Q8IVV2 1947 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 SMCO2A6NFE2 343 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 PP2D1A8MPX8 630 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 KLRF2D3W0D1 207 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 CCNT1O60563 726 aaKnown RBP6.27□□□□□ -1.41
CTNS-210ENST00000576979 RPS6KA4O75676 772 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 IDEP14735 1019 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 KLRK1P26718 216 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 DNAJA1P31689 397 aaKnown RBP6.27□□□□□ -1.41
CTNS-210ENST00000576979 ACTN2P35609 894 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 VAV2P52735 878 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 HERVK_113P62684 666 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 CDK17Q00537 523 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 DSC3Q14574 896 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 ZSCAN26Q16670 478 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 CYP27C1Q4G0S4 372 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 COBLL1Q53SF7 1204 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 PAPD7Q5XG87 772 aaKnown RBP6.27□□□□□ -1.41
CTNS-210ENST00000576979 SDE2Q6IQ49 451 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 IRF2BP1Q8IU81 584 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 TRIM58Q8NG06 486 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 AFAP1L1Q8TED9 768 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
CTNS-210ENST00000576979 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 SECISBP2LQ93073 1101 aaKnown RBP6.27□□□□□ -1.41
CTNS-210ENST00000576979 DYNLL2Q96FJ2 89 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 CAPZA3Q96KX2 299 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 CCDC42Q96M95 316 aa6.27□□□□□ -1.41
CTNS-210ENST00000576979 ERGIC2Q96RQ1 377 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms