RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CCDC113Q9H0I3 377 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 RBM19Q9Y4C8 960 aaKnown RBP21.9■■□□□ 1.1
CMTM3-211ENST00000565922 K7ERI5 159 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 NPTXRO95502 500 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 SLC12A3P55017 1021 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 PEX3P56589 373 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 COL19A1Q14993 1142 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 TMEM175Q9BSA9 504 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 NRDE2Q9H7Z3 1164 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 NGRNQ9NPE2 291 aaKnown RBP21.89■■□□□ 1.09
CMTM3-211ENST00000565922 KMT5AQ9NQR1 393 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 STK39Q9UEW8 545 aa21.89■■□□□ 1.09
CMTM3-211ENST00000565922 SRPRBQ9Y5M8 271 aaKnown RBP21.89■■□□□ 1.09
CMTM3-211ENST00000565922 INPPL1O15357 1258 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 LIG1P18858 919 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 KCNA5P22460 613 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 PBX3P40426 434 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 NPTX2P47972 431 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 SMTNP53814 917 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 DCAF4L1Q3SXM0 396 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 FAM173BQ6P4H8 233 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 ZNF396Q96N95 335 aaPredicted RBP21.88■■□□□ 1.09
CMTM3-211ENST00000565922 NXF3Q9H4D5 531 aaKnown RBP21.88■■□□□ 1.09
CMTM3-211ENST00000565922 TMEM134Q9H6X4 195 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 ENTPD7Q9NQZ7 604 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 CLDND1Q9NY35 253 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 CCDC39Q9UFE4 941 aa21.88■■□□□ 1.09
CMTM3-211ENST00000565922 MARCKSP29966 332 aaPredicted RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 IRS1P35568 1242 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 MLH1P40692 756 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 CEBPZQ03701 1054 aaKnown RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 GRIN1Q05586 938 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 HYAL1Q12794 435 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 MAPK7Q13164 816 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 PUS10Q3MIT2 529 aaKnown RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 LEXMQ3ZCV2 418 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 EP400NLQ6ZTU2 488 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 DAW1Q8N136 415 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 USP28Q96RU2 1077 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 RPS6KC1Q96S38 1066 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 CDCA3Q99618 268 aaPredicted RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 TCF25Q9BQ70 676 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 KIFC3Q9BVG8 833 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 APOL6Q9BWW8 343 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 GBP3Q9H0R5 595 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 PDZD7Q9H5P4 517 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 LARSQ9P2J5 1176 aaKnown RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 FBXO2Q9UK22 296 aaPredicted RBP21.87■■□□□ 1.09
CMTM3-211ENST00000565922 ODF2LQ9ULJ1 636 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 HES2Q9Y543 173 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 CITO14578 2027 aa21.87■■□□□ 1.09
CMTM3-211ENST00000565922 ARL5CA6NH57 179 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 H0YCG3 227 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 NR1I2O75469 434 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 GALTP07902 379 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 PLS3P13797 630 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 PLCG1P19174 1290 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 KCNQ1P51787 676 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 SLC39A14Q15043 492 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 KARSQ15046 597 aaKnown RBP21.86■■□□□ 1.09
CMTM3-211ENST00000565922 ATF7IP2Q5U623 682 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 CDR2LQ86X02 465 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-211ENST00000565922 SPIRE2Q8WWL2 714 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 GAD1Q99259 594 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 NTPCRQ9BSD7 190 aaKnown RBP21.86■■□□□ 1.09
CMTM3-211ENST00000565922 TLE6Q9H808 572 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 POLD4Q9HCU8 107 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 ARHGAP28Q9P2N2 729 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 FAM50BQ9Y247 325 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 TRIP11Q15643 1979 aa21.86■■□□□ 1.09
CMTM3-211ENST00000565922 FSCN2O14926 492 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 POMCP01189 267 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 ALDH2P05091 517 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 BMP1P13497 986 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 SCP2P22307 547 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 NASPP49321 788 aaPredicted RBP21.85■■□□□ 1.09
CMTM3-211ENST00000565922 ERVFC1P60507 584 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 SMC1AQ14683 1233 aaKnown RBP21.85■■□□□ 1.09
CMTM3-211ENST00000565922 STK38Q15208 465 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 CTC1Q2NKJ3 1217 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 TMC7Q7Z402 723 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 GPBP1Q86WP2 473 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 KRI1Q8N9T8 703 aaKnown RBP21.85■■□□□ 1.09
CMTM3-211ENST00000565922 ADAMTS19Q8TE59 1207 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 LARP4BQ92615 738 aaKnown RBP21.85■■□□□ 1.09
CMTM3-211ENST00000565922 RAD54LQ92698 747 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 IGSF21Q96ID5 467 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 MRPL4Q9BYD3 311 aaKnown RBP21.85■■□□□ 1.09
CMTM3-211ENST00000565922 RNF39Q9H2S5 420 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 IGFLR1Q9H665 355 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 STK17AQ9UEE5 414 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 PARP2Q9UGN5 583 aa21.85■■□□□ 1.09
CMTM3-211ENST00000565922 NT5C1B-RDH14C9J2C7 533 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 KRT18P05783 430 aaKnown RBP21.84■■□□□ 1.09
CMTM3-211ENST00000565922 SRGAP2BP0DMP2 458 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 NRIP1P48552 1158 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 RAD51AP2Q09MP3 1159 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 GRIK3Q13003 919 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 STRN3Q13033 797 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 GIT2Q14161 759 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms