RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ZNF703Q9H7S9 590 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-207ENST00000558919 IFT122Q9HBG6 1241 aa5.08□□□□□ -1.6
VPS13C-207ENST00000558919 STC2O76061 302 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 GNAT2P19087 354 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 GZMKP49863 264 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 SLC5A3P53794 718 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 AMPD3Q01432 767 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 KLF1Q13351 362 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-207ENST00000558919 FOXE3Q13461 319 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 TOR2AQ5JU69 321 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 MIIPQ5JXC2 388 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 METTL24Q5JXM2 366 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 FAM180AQ6UWF9 173 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 HTR3DQ70Z44 454 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 ELOA2Q8IYF1 753 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-207ENST00000558919 CNTD1Q8N815 330 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 GLB1L3Q8NCI6 653 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-207ENST00000558919 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 ST8SIA2Q92186 375 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 ZNF747Q9BV97 191 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 CCM2LQ9NUG4 571 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-207ENST00000558919 DNAJC28Q9NX36 388 aa5.07□□□□□ -1.6
VPS13C-207ENST00000558919 CANXP27824 592 aaKnown RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 CRHR1P34998 444 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 MTNR1BP49286 362 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 MAN2A2P49641 1150 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 RABGGTBP53611 331 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 CRHR2Q13324 411 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 RRP1BQ14684 758 aaKnown RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 ADRM1Q16186 407 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 NAIF1Q69YI7 327 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 CRIP3Q6Q6R5 217 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 Q6ZRM9 215 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 DOK3Q7L591 496 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 FAM83AQ86UY5 434 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 GPR156Q8NFN8 814 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 ZNF480Q8WV37 535 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 ATXN2LQ8WWM7 1075 aaKnown RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 RIN2Q8WYP3 895 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 CDC5LQ99459 802 aaKnown RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 ACE2Q9BYF1 805 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-207ENST00000558919 VPS11Q9H270 941 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 GREM2Q9H772 168 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 GPRC5DQ9NZD1 345 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 SCOCQ9UIL1 159 aa5.06□□□□□ -1.6
VPS13C-207ENST00000558919 XDHP47989 1333 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 KLRG2A4D1S0 409 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-207ENST00000558919 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 GOLGA6L6A8MZA4 724 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 ITGA10O75578 1167 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 CFBP00751 764 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 AMHP03971 560 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 CDK11BP21127 795 aaKnown RBP5.05□□□□□ -1.6
VPS13C-207ENST00000558919 SCNN1GP51170 649 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 ZXDAP98168 799 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 APBA1Q02410 837 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 INAVAQ3KP66 663 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 MUM1L1Q5H9M0 696 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 PDZD4Q76G19 769 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-207ENST00000558919 LILRA3Q8N6C8 439 aaPredicted RBP5.05□□□□□ -1.6
VPS13C-207ENST00000558919 MNTQ99583 582 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 GPR87Q9BY21 358 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 EPC1Q9H2F5 836 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 CLCA2Q9UQC9 943 aa5.05□□□□□ -1.6
VPS13C-207ENST00000558919 ALG1L2C9J202 215 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 AKR1B10O60218 316 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 TACR2P21452 398 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 GUCY2FP51841 1108 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 CCT2P78371 535 aaKnown RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 PTH1RQ03431 593 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 MALLQ13021 153 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 MST1LQ2TV78 715 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 FAM214AQ32MH5 1076 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 C1QL3Q5VWW1 255 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 MBNL2Q5VZF2 373 aaKnown RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 AMOTL1Q8IY63 956 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 MB21D1Q8N884 522 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 SSH1Q8WYL5 1049 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 PLEKHG4BQ96PX9 1271 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 CPPED1Q9BRF8 314 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 TRIM8Q9BZR9 551 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 BCO1Q9HAY6 547 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 ZNF277Q9NRM2 450 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 RBM12Q9NTZ6 932 aaKnown RBP5.04□□□□□ -1.6
VPS13C-207ENST00000558919 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 CEP72Q9P209 647 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 TRPS1Q9UHF7 1281 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 ZBTB21Q9ULJ3 1066 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 HDAC5Q9UQL6 1122 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 GPR45Q9Y5Y3 372 aa5.04□□□□□ -1.6
VPS13C-207ENST00000558919 PEX11BO96011 259 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 C1SP09871 688 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 C6P13671 934 aa5.03□□□□□ -1.6
VPS13C-207ENST00000558919 HSP90B1P14625 803 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms