RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 SLC46A2Q9BY10 475 aa5.92□□□□□ -1.46
SCFD1-217ENST00000555953 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
SCFD1-217ENST00000555953 TMPRSS11EQ9UL52 423 aa5.92□□□□□ -1.46
SCFD1-217ENST00000555953 PPP2R3BQ9Y5P8 575 aa5.92□□□□□ -1.46
SCFD1-217ENST00000555953 NRP2O60462 931 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 LPXNO60711 386 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 LAG3P18627 525 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 GPR15P49685 360 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 PPARAQ07869 468 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 TERF2Q15554 542 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 CSRP2Q16527 193 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 GPRIN1Q7Z2K8 1008 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 LYSMD2Q8IV50 215 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 LILRA3Q8N6C8 439 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-217ENST00000555953 BEND2Q8NDZ0 799 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 NINJ1Q92982 152 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 MYEOVQ96EZ4 313 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 HDAC5Q9UQL6 1122 aa5.91□□□□□ -1.46
SCFD1-217ENST00000555953 LEFTY2O00292 366 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 B3GALT2O43825 422 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 NUDT3O95989 172 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 XPAP23025 273 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-217ENST00000555953 LSP1P33241 339 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 UBE3CQ15386 1083 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 HECTD2Q5U5R9 776 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 IQSEC1Q6DN90 963 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 LMBR1LQ6UX01 489 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 DHX37Q8IY37 1157 aaKnown RBP5.9□□□□□ -1.46
SCFD1-217ENST00000555953 TARS2Q9BW92 718 aaKnown RBP5.9□□□□□ -1.46
SCFD1-217ENST00000555953 PRDM12Q9H4Q4 367 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 FANCLQ9NW38 375 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 TRPM5Q9NZQ8 1165 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 EVLQ9UI08 416 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-217ENST00000555953 CHST2Q9Y4C5 530 aa5.9□□□□□ -1.46
SCFD1-217ENST00000555953 COL4A3Q01955 1670 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 MANFP55145 182 aaKnown RBP5.89□□□□□ -1.47
SCFD1-217ENST00000555953 NRG3P56975 720 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 TRIM25Q14258 630 aaKnown RBP5.89□□□□□ -1.47
SCFD1-217ENST00000555953 BTNL9Q6UXG8 535 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 GDF7Q7Z4P5 450 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 SLC41A1Q8IVJ1 513 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 NIM1KQ8IY84 436 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCFD1-217ENST00000555953 ANKFY1Q9P2R3 1169 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 PRSS50Q9UI38 385 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 NUMBLQ9Y6R0 609 aa5.89□□□□□ -1.47
SCFD1-217ENST00000555953 TMEM200CA6NKL6 621 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 NCR1O76036 304 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 CLEC2LP0C7M8 214 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 ADCYAP1R1P41586 468 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 LSSP48449 732 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 SCNN1BP51168 640 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 OCRLQ01968 901 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 Q6YL49 198 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 SYT12Q8IV01 421 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 GLB1L2Q8IW92 636 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 APPBP2Q92624 585 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 TEX101Q9BY14 249 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 ANO3Q9BYT9 981 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 TOR3AQ9H497 397 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 SERHL2Q9H4I8 314 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
SCFD1-217ENST00000555953 RNASET2O00584 256 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 KDM1AO60341 852 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 PRAMEF4O60810 478 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 TMEM127O75204 238 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 LTA4HP09960 611 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 HSP90B1P14625 803 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 ZSCAN20P17040 1043 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 ZEB1P37275 1124 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 RNASE9P60153 205 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 NHLH2Q02577 135 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 SART3Q15020 963 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 PPM1KQ8N3J5 372 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 DCLRE1CQ96SD1 692 aaKnown RBP5.87□□□□□ -1.47
SCFD1-217ENST00000555953 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 ZNHIT2Q9UHR6 403 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 ZMYM3Q14202 1370 aa5.87□□□□□ -1.47
SCFD1-217ENST00000555953 NDUFA10O95299 355 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 FKBP9O95302 570 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 FBLP22087 321 aaKnown RBP5.86□□□□□ -1.47
SCFD1-217ENST00000555953 IL2P60568 153 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 APBA1Q02410 837 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 CCDC62Q6P9F0 684 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 OLFML1Q6UWY5 402 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 FKBP9P1Q75LS8 142 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 ARHGEF19Q8IW93 802 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 OR10H5Q8NGA6 315 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 OR2W6PQ8NHA6 318 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 UBXN4Q92575 508 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 VOPP1Q96AW1 172 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms