RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
SRP54-205ENST00000554803 KIAA1671Q9BY89 1806 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 LOC730098B7Z3J9 87 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 MCM7P33993 719 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
SRP54-205ENST00000554803 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
SRP54-205ENST00000554803 NAPAP54920 295 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 HYAL1Q12794 435 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 PSMD2Q13200 908 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 CASP8Q14790 479 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 SPA17Q15506 151 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 USH1GQ495M9 461 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 CPLX3Q8WVH0 158 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 P2RX5Q93086 422 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 ASIC4Q96FT7 647 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
SRP54-205ENST00000554803 VPS16Q9H269 839 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 CD207Q9UJ71 328 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
SRP54-205ENST00000554803 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 POLR3GO15318 223 aaPredicted RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 TBX10O75333 385 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 LGR5O75473 907 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 AMHP03971 560 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 NBL1P41271 181 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 VAV2P52735 878 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 HNRNPH2P55795 449 aaKnown RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 GLE1Q53GS7 698 aaKnown RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 EARS2Q5JPH6 523 aaKnown RBP12.16□□□□□ -0.46
SRP54-205ENST00000554803 CCDC122Q5T0U0 273 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 KIAA1328Q86T90 577 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 TTYH3Q9C0H2 523 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 MAF1Q9H063 256 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 TAB2Q9NYJ8 693 aa12.16□□□□□ -0.46
SRP54-205ENST00000554803 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 OPLAHO14841 1288 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 KLRC4O43908 158 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TACC1O75410 805 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 LCA5LO95447 670 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 ICAM1P05362 532 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 APBA1Q02410 837 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 NNTQ13423 1086 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.46
SRP54-205ENST00000554803 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 IRF2BP1Q8IU81 584 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TEX2Q8IWB9 1127 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 MMGT1Q8N4V1 131 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.15□□□□□ -0.46
SRP54-205ENST00000554803 SYN2Q92777 582 aaPredicted RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 COPS5Q92905 334 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 MPHOSPH6Q99547 160 aaKnown RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 MTRQ99707 1265 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TUBGCP2Q9BSJ2 902 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 ABCB6Q9NP58 842 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 PUF60Q9UHX1 559 aaKnown RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
SRP54-205ENST00000554803 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
SRP54-205ENST00000554803 SPTBN2O15020 2390 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 SMCO2A6NFE2 343 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 RBAK-RBAKDNI3L0D1 243 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
SRP54-205ENST00000554803 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
SRP54-205ENST00000554803 KRT37O76014 449 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 EYA4O95677 639 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 GNA14O95837 355 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms