RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GPR87Q9BY21 358 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 KCTD10Q9H3F6 313 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 NCDNQ9UBB6 729 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 TRPS1Q9UHF7 1281 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 KCNG1Q9UIX4 513 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 BRINP1O60477 761 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 LTA4HP09960 611 aaKnown RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 XPAP23025 273 aaPredicted RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 SOX5P35711 763 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 CASRP41180 1078 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 ABHD18Q0P651 414 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 STRN3Q13033 797 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 CRHR2Q13324 411 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 UBE3CQ15386 1083 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 CT83Q5H943 113 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 LMBR1LQ6UX01 489 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 ZNF662Q6ZS27 426 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 GPRIN1Q7Z2K8 1008 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 KRT26Q7Z3Y9 468 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 GSPT2Q8IYD1 628 aaKnown RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 UBR7Q8N806 425 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 ATXN2LQ8WWM7 1075 aaKnown RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 ST8SIA2Q92186 375 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 ARL8AQ96BM9 186 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 LSM14BQ9BX40 385 aaKnown RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 CSRNP2Q9H175 543 aa5.05□□□□□ -1.6
LEMD3-204ENST00000542032 SLKQ9H2G2 1235 aaPredicted RBP5.05□□□□□ -1.6
LEMD3-204ENST00000542032 GOLGA6L6A8MZA4 724 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 LPLP06858 475 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 ENPP1P22413 925 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 LMO1P25800 156 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 MCM7P33993 719 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 GZMKP49863 264 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 CNGB1Q14028 1251 aaPredicted RBP5.04□□□□□ -1.6
LEMD3-204ENST00000542032 FAM214AQ32MH5 1076 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 DOK3Q7L591 496 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 OR52N2Q8NGI0 321 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 CHAC2Q8WUX2 184 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 LMBR1Q8WVP7 490 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
LEMD3-204ENST00000542032 GYPEP15421 78 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 GNAT2P19087 354 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 LGALS4P56470 323 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 UGT8Q16880 541 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 EGFLAMQ63HQ2 1017 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 ABHD15Q6UXT9 468 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 RHOUQ7L0Q8 258 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 MB21D1Q8N884 522 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 OR5M3Q8NGP4 307 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 ZNF483Q8TF39 744 aaPredicted RBP5.03□□□□□ -1.6
LEMD3-204ENST00000542032 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
LEMD3-204ENST00000542032 IL17RAQ96F46 866 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 PAWRQ96IZ0 340 aaKnown RBP5.03□□□□□ -1.6
LEMD3-204ENST00000542032 CPEB1Q9BZB8 566 aaKnown RBP5.03□□□□□ -1.6
LEMD3-204ENST00000542032 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
LEMD3-204ENST00000542032 DNAJC6O75061 913 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 POU3F3P20264 500 aaPredicted RBP5.02□□□□□ -1.61
LEMD3-204ENST00000542032 MAKP20794 623 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 CTSSP25774 331 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 MRPS9P82933 396 aaKnown RBP5.02□□□□□ -1.61
LEMD3-204ENST00000542032 DUSP2Q05923 314 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 FHL2Q14192 279 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 STAT4Q14765 748 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 CSRP2Q16527 193 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.02□□□□□ -1.61
LEMD3-204ENST00000542032 Q6ZPA2 131 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 KCNK18Q7Z418 384 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 HDGFL2Q7Z4V5 671 aaPredicted RBP5.02□□□□□ -1.61
LEMD3-204ENST00000542032 FAM83AQ86UY5 434 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 CMIPQ8IY22 773 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 RAX2Q96IS3 184 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 MMRN2Q9H8L6 949 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 SCOCQ9UIL1 159 aa5.02□□□□□ -1.61
LEMD3-204ENST00000542032 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.02□□□□□ -1.61
LEMD3-204ENST00000542032 NR4A1P22736 598 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 INHBEP58166 350 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 FAPQ12884 760 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 VPS72Q15906 364 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 LHFPL2Q6ZUX7 228 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 GLB1L3Q8NCI6 653 aaPredicted RBP5.01□□□□□ -1.61
LEMD3-204ENST00000542032 TSPEARQ8WU66 669 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 LARP4BQ92615 738 aaKnown RBP5.01□□□□□ -1.61
LEMD3-204ENST00000542032 TMX1Q9H3N1 280 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 PRKAB1Q9Y478 270 aa5.01□□□□□ -1.61
LEMD3-204ENST00000542032 K7ESF4 209 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 TRIM24O15164 1050 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 GPR39O43194 453 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 GASTP01350 101 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 HK1P19367 917 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 PURAQ00577 322 aaKnown RBP5□□□□□ -1.61
LEMD3-204ENST00000542032 DPTQ07507 201 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 MST1LQ2TV78 715 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 DRICH1Q6PGQ1 229 aaPredicted RBP5□□□□□ -1.61
LEMD3-204ENST00000542032 PCSK4Q6UW60 755 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 BTNL9Q6UXG8 535 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 ZNF627Q7L945 461 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms