RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DDHD2O94830 711 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 POMCP01189 267 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 AKAP5P24588 427 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 MLH1P40692 756 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 KCNQ1P51787 676 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ERVFC1P60507 584 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 HYAL1Q12794 435 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 MCM6Q14566 821 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 SLC39A11Q8N1S5 342 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 KCTD17Q8N5Z5 321 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 BCL7CQ8WUZ0 217 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ATXN2LQ8WWM7 1075 aaKnown RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 HLA-CQ95604 372 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ASB2Q96Q27 587 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 GAD1Q99259 594 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 COL25A1Q9BXS0 654 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 GBP3Q9H0R5 595 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 MIOSQ9NXC5 875 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 ARHGAP28Q9P2N2 729 aa16.62■□□□□ 0.25
UBE3B-212ENST00000540230 TCF20Q9UGU0 1960 aaKnown RBP16.62■□□□□ 0.25
UBE3B-212ENST00000540230 TDRD15B5MCY1 1934 aaKnown RBP16.61■□□□□ 0.25
UBE3B-212ENST00000540230 SLC26A4O43511 780 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 F13A1P00488 732 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 PLCB3Q01970 1234 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 DMP1Q13316 513 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-212ENST00000540230 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 MRPS27Q92552 414 aaKnown RBP16.61■□□□□ 0.25
UBE3B-212ENST00000540230 RAD54LQ92698 747 aa16.61■□□□□ 0.25
UBE3B-212ENST00000540230 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-212ENST00000540230 UBE2ZQ9H832 354 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-212ENST00000540230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
UBE3B-212ENST00000540230 ARL5CA6NH57 179 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 SLC16A4O15374 487 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 SLC11A1P49279 550 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 SCNN1GP51170 649 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 MRPS5P82675 430 aaKnown RBP16.6■□□□□ 0.25
UBE3B-212ENST00000540230 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
UBE3B-212ENST00000540230 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 GPBP1Q86WP2 473 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 GSTCDQ8NEC7 633 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 RASSF8Q8NHQ8 419 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 CXCL16Q9H2A7 254 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 TLR9Q9NR96 1032 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 SPG21Q9NZD8 308 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 KLK14Q9P0G3 267 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 COG5Q9UP83 839 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 MORC2Q9Y6X9 1032 aaPredicted RBP16.6■□□□□ 0.25
UBE3B-212ENST00000540230 C5orf42Q9H799 3197 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 PHLPP2Q6ZVD8 1323 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 A0A087X0B3 334 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 K7ERI5 159 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 FSCN2O14926 492 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 N4BP3O15049 544 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 INPPL1O15357 1258 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 LINC01565O15544 149 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 GALTP07902 379 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 PPM1AP35813 382 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 EFNA5P52803 228 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 UBE3AQ05086 875 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 URGCPQ8TCY9 931 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
UBE3B-212ENST00000540230 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
UBE3B-212ENST00000540230 PLS3P13797 630 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 KCNA5P22460 613 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 ALDH7A1P49419 539 aaKnown RBP16.59■□□□□ 0.25
UBE3B-212ENST00000540230 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
UBE3B-212ENST00000540230 STK38Q15208 465 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 ATF7IP2Q5U623 682 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 PLPP4Q5VZY2 271 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
UBE3B-212ENST00000540230 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
UBE3B-212ENST00000540230 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
UBE3B-212ENST00000540230 IGFLR1Q9H665 355 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 TMEM134Q9H6X4 195 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 C17orf75Q9HAS0 396 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 CLDND1Q9NY35 253 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 SNTG2Q9NY99 539 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 KCND2Q9NZV8 630 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 LZTS1Q9Y250 596 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 GIT1Q9Y2X7 761 aa16.59■□□□□ 0.25
UBE3B-212ENST00000540230 H3BQ06 376 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-212ENST00000540230 SPTLC2O15270 562 aa16.58■□□□□ 0.24
UBE3B-212ENST00000540230 LTBRP36941 435 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms