RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 RNASELQ05823 741 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 SMC1AQ14683 1233 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 EMC2Q15006 297 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 XKR9Q5GH70 373 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 LRRC55Q6ZSA7 311 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 SRGAP1Q7Z6B7 1085 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 KSR1Q8IVT5 923 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 TPH2Q8IWU9 490 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 DIS3L2Q8IYB7 885 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 URGCPQ8TCY9 931 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 PRPF31Q8WWY3 499 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 TMEM143Q96AN5 459 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 PGBD4Q96DM1 585 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 TMEM169Q96HH4 297 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 DYDC2Q96IM9 177 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 DHX33Q9H6R0 707 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 AGPAT5Q9NUQ2 364 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 FAM105AQ9NUU6 356 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 CLEC1BQ9P126 229 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 RAPGEFL1Q9UHV5 662 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 PCDHA12Q9UN75 941 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 C5orf42Q9H799 3197 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 DTNBO60941 627 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 ERLIN2O94905 339 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 LARGE1O95461 756 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 SRGAP2CP0DJJ0 459 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 FDPSP14324 419 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 CA8P35219 290 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 PLA2G5P39877 138 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 BCAR1P56945 870 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 SPIRE1Q08AE8 756 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 LAMTOR4Q0VGL1 99 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 TFDP1Q14186 410 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 CTTNQ14247 550 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 MXD4Q14582 209 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 PCBP1Q15365 356 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 NOMO2Q5JPE7 1267 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 EARS2Q5JPH6 523 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 SLC39A11Q8N1S5 342 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 RNF149Q8NC42 400 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 FAM122AQ96E09 287 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 EIF2AK1Q9BQI3 630 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 TTC12Q9H892 705 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 IFT122Q9HBG6 1241 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 WRAP73Q9P2S5 460 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 STK39Q9UEW8 545 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 INPP5FQ9Y2H2 1132 aa9.47□□□□□ -0.89
CTNNA1-242ENST00000524292 BTBD18B2RXH4 712 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 JAK2O60674 1132 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 ZNF623O75123 536 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 HOXB8P17481 243 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 TECP42680 631 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 GUCA2AQ02747 115 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 LONRF3Q496Y0 759 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 MSS51Q4VC12 460 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 LLGL2Q6P1M3 1020 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 TMEM184AQ6ZMB5 413 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 CASP10Q92851 521 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 LPPQ93052 612 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 PHF7Q9BWX1 381 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 GBP3Q9H0R5 595 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 ANKEF1Q9NU02 776 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 TBC1D13Q9NVG8 400 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 KANSL3Q9P2N6 904 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 LIMCH1Q9UPQ0 1083 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 PCDHB2Q9Y5E7 798 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 CNTNAP2Q9UHC6 1331 aa9.46□□□□□ -0.9
CTNNA1-242ENST00000524292 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 C2orf71A6NGG8 1288 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 HIDE1A8MVS5 230 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 DGAT1O75907 488 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 SLITRK3O94933 977 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 LYPLA2O95372 231 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 AXLP30530 894 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 TXKP42681 527 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 GNL2Q13823 731 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 GIT2Q14161 759 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 HERC4Q5GLZ8 1057 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 ANKRD54Q6NXT1 300 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 NOTUMQ6P988 496 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 HACE1Q8IYU2 909 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 VPS52Q8N1B4 723 aa9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 MRPL43Q8N983 215 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-242ENST00000524292 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms