RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 MKL1Q969V6 931 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 EAF2Q96CJ1 260 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 RMDN3Q96TC7 470 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 KCNK12Q9HB15 430 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 GOLGA2P5Q9HBQ8 144 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 ARHGEF3Q9NR81 526 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 DZANK1Q9NVP4 752 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 PAG1Q9NWQ8 432 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 ANKFY1Q9P2R3 1169 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 WNT16Q9UBV4 365 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 DDX41Q9UJV9 622 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 GINS2Q9Y248 185 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 GTF3C3Q9Y5Q9 886 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 HCFC2Q9Y5Z7 792 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 KCNMB2Q9Y691 235 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 COL11A1P12107 1806 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 FASNP49327 2511 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 FRMPD2Q68DX3 1309 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 FLNBO75369 2602 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 ZNFX1Q9P2E3 1918 aaKnown RBP4.4□□□□□ -1.7
NPM1-210ENST00000523339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 HIDE1A8MVS5 230 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 F8W735 103 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 IPO8O15397 1037 aaKnown RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 NARSO43776 548 aaKnown RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 RANBP6O60518 1105 aaKnown RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 FOXD2O60548 495 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 MMP20O60882 483 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 CT47B1P0C2W7 299 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 C1QTNF9P0C862 333 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 FSTP19883 344 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 EDNRBP24530 442 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 WEE1P30291 646 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 CD52P31358 61 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 PPM1AP35813 382 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 GATMP50440 423 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 IGBP1P78318 339 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 GPLD1P80108 840 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 LPIN1Q14693 890 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 PTPN14Q15678 1187 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 C11orf91Q3C1V1 193 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 N4BP2L1Q5TBK1 243 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 KIAA1841Q6NSI8 718 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 TAF2Q6P1X5 1199 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 CCDC62Q6P9F0 684 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 TMEM184AQ6ZMB5 413 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 TSHZ1Q6ZSZ6 1077 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 TMEM130Q8N3G9 435 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 RNF169Q8NCN4 708 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 GALNT11Q8NCW6 608 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 GPR152Q8TDT2 470 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 DCAF4Q8WV16 495 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 MRPS27Q92552 414 aaKnown RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 GLG1Q92896 1179 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 ZNF689Q96CS4 500 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 ZNF558Q96NG5 402 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 IWS1Q96ST2 819 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 USP26Q9BXU7 913 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 FAM49AQ9H0Q0 323 aaPredicted RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 RANBP17Q9H2T7 1088 aaKnown RBP4.4□□□□□ -1.71
NPM1-210ENST00000523339 RNPEPQ9H4A4 650 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 IL1RAPL2Q9NP60 686 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 ZSCAN32Q9NX65 697 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 KCNK4Q9NYG8 393 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
NPM1-210ENST00000523339 NAV1Q8NEY1 1877 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 GPR179Q6PRD1 2367 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CEP295Q9C0D2 2601 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 TCRBV5S4A2TA0A5A2 114 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 HAS3O00219 553 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 NCAM2O15394 837 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 PLA2G6O60733 806 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CXCL14O95715 111 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CFBP00751 764 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CHRNA1P02708 482 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 LGALS2P05162 132 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 LINC00271P0C7V0 271 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 RARAP10276 462 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 HSPD1P10809 573 aaKnown RBP4.39□□□□□ -1.71
NPM1-210ENST00000523339 SRFP11831 508 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 GNAT2P19087 354 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 ADD2P35612 726 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 NRLP54845 237 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 RING1Q06587 406 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 TMEM62Q0P6H9 643 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 PPFIA1Q13136 1202 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 UBE3CQ15386 1083 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 ZNF528Q3MIS6 628 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 HSDL1Q3SXM5 330 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 GNPTABQ3T906 1256 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 HSP90AB4PQ58FF6 505 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 ODR4Q5SWX8 454 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CELF3Q5SZQ8 465 aaKnown RBP4.39□□□□□ -1.71
NPM1-210ENST00000523339 LAIR1Q6GTX8 287 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 TTBK2Q6IQ55 1244 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 PHLDB3Q6NSJ2 640 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 ANKMY2Q8IV38 441 aa4.39□□□□□ -1.71
NPM1-210ENST00000523339 CMTR1Q8N1G2 835 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms