RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ADRB2P07550 413 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
SREK1-209ENST00000520953 EEF1GP26641 437 aaKnown RBP16.45■□□□□ 0.22
SREK1-209ENST00000520953 EFNA5P52803 228 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 CCDC40Q4G0X9 1142 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 POMGNT1Q8WZA1 660 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 ARMC5Q96C12 935 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 ACO2Q99798 780 aaKnown RBP16.45■□□□□ 0.22
SREK1-209ENST00000520953 C2orf40Q9H1Z8 148 aa16.45■□□□□ 0.22
SREK1-209ENST00000520953 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
SREK1-209ENST00000520953 A0A1B0GTH6 734 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 TULP1O00294 542 aaPredicted RBP16.44■□□□□ 0.22
SREK1-209ENST00000520953 ABLIM1O14639 778 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 B4GALT4O60513 344 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 EXOC3O60645 756 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 CABYRO75952 493 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 BORCS6Q96GS4 357 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
SREK1-209ENST00000520953 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 ACKR2O00590 384 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 PIGRP01833 764 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 WNT7BP56706 349 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
SREK1-209ENST00000520953 NR1I3Q14994 352 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 NFIL3Q16649 462 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 IFNLR1Q8IU57 520 aaPredicted RBP16.44■□□□□ 0.22
SREK1-209ENST00000520953 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 MRPL4Q9BYD3 311 aaKnown RBP16.44■□□□□ 0.22
SREK1-209ENST00000520953 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 KCNG1Q9UIX4 513 aa16.44■□□□□ 0.22
SREK1-209ENST00000520953 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 N4BP3O15049 544 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 TSPAN1O60635 241 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 CHRNA1P02708 482 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 RPL13P26373 211 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 TAF2Q6P1X5 1199 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 ZNF410Q86VK4 478 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 TRIM59Q8IWR1 403 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 FAM186BQ8IYM0 893 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 PCDH10Q9P2E7 1040 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 CDY2AQ9Y6F7 541 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 SGPL1O95470 568 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 DARSP14868 501 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 THPOP40225 353 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 ACOT2P49753 483 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 KLK7P49862 253 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 DLG4P78352 724 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 POU5F1BQ06416 359 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 SPAG1Q07617 926 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 SNX17Q15036 470 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 FAM114A1Q8IWE2 563 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 CEP120Q8N960 986 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
SREK1-209ENST00000520953 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
SREK1-209ENST00000520953 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 ARVCFO00192 962 aa16.42■□□□□ 0.22
SREK1-209ENST00000520953 FGFR1OPO95684 399 aaKnown RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 TRIM49P0CI25 452 aa16.42■□□□□ 0.22
SREK1-209ENST00000520953 TRIM49CP0CI26 452 aa16.42■□□□□ 0.22
SREK1-209ENST00000520953 PSMC2P35998 433 aaKnown RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.22
SREK1-209ENST00000520953 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 DCAF17Q5H9S7 520 aaPredicted RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
SREK1-209ENST00000520953 PTPRHQ9HD43 1115 aa16.42■□□□□ 0.22
SREK1-209ENST00000520953 ARMCX3Q9UH62 379 aaPredicted RBP16.42■□□□□ 0.22
SREK1-209ENST00000520953 A0A0B4J269 797 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 EPB41P11171 864 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 TNFSF9P41273 254 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 TMEM132AQ24JP5 1023 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 CRELD2Q6UXH1 353 aaPredicted RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 TSHZ1Q6ZSZ6 1077 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 TMEM192Q8IY95 271 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 CELF4Q9BZC1 486 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 GCOM2Q9BZD3 368 aaPredicted RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 PRMT7Q9NVM4 692 aaPredicted RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 NOD1Q9Y239 953 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 CNTNAP2Q9UHC6 1331 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 SLC16A3O15427 465 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms