RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 NPTXRO95502 500 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 NDUFV1P49821 464 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 PEX3P56589 373 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 PLPP4Q5VZY2 271 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 C1orf186Q6ZWK4 172 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 CABP7Q86V35 215 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 AK8Q96MA6 479 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 PNMA5Q96PV4 448 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 PARP2Q9UGN5 583 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 KCNG1Q9UIX4 513 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 FAM50BQ9Y247 325 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 RALGAPA2Q2PPJ7 1873 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 NCOR1O75376 2440 aa12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
ARHGEF28-213ENST00000513841 ARL5CA6NH57 179 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 SFI1A8K8P3 1242 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 HIP1RO75146 1068 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 NR1I2O75469 434 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 PRKCBP05771 671 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 AKAP5P24588 427 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 CLUL1Q15846 466 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 HYIQ5T013 277 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 TMEM87AQ8NBN3 555 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 SNX21Q969T3 373 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 CDCA3Q99618 268 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 TMEM175Q9BSA9 504 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 KLK14Q9P0G3 267 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
ARHGEF28-213ENST00000513841 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 HIDE1A8MVS5 230 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 NRP1O14786 923 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 N4BP3O15049 544 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 SLC26A4O43511 780 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 IL9P15248 144 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 CA8P35219 290 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 NPTX2P47972 431 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 SLC11A1P49279 550 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 DUSP6Q16828 381 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 RASSF8Q8NHQ8 419 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 ZFP42Q96MM3 310 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 TIPINQ9BVW5 301 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 C17orf75Q9HAS0 396 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 CLEC1BQ9P126 229 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 CD207Q9UJ71 328 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-213ENST00000513841 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 STX6O43752 255 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 MLH1P40692 756 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 OR1G1P47890 313 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 SCNN1GP51170 649 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 SMTNP53814 917 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 GRIN1Q05586 938 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 NT5DC1Q5TFE4 455 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 TMEM173Q86WV6 379 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 DAW1Q8N136 415 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 ZSCAN16Q9H4T2 348 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 PDZD7Q9H5P4 517 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 SNTG2Q9NY99 539 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
ARHGEF28-213ENST00000513841 C2orf71A6NGG8 1288 aa12.74□□□□□ -0.37
ARHGEF28-213ENST00000513841 INPPL1O15357 1258 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms