RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 ECE2O60344 883 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 TMPRSS15P98073 1019 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 ASPHQ12797 758 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 COASYQ13057 564 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 DAB2IPQ5VWQ8 1189 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 EFHD1Q9BUP0 239 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 O00370 1275 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 SERPINB3P29508 390 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 CYLC2Q14093 348 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 RASA3Q14644 834 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 BBS9Q3SYG4 887 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 RFX8Q6ZV50 586 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 JAMLQ86YT9 394 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 WDR75Q8IWA0 830 aaKnown RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 PDIK1LQ8N165 341 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 B4GALNT2Q8NHY0 566 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 TRIM56Q9BRZ2 755 aaKnown RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 WNT8AQ9H1J5 351 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 CCDC68Q9H2F9 335 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
TCOF1-211ENST00000513346 SMG5Q9UPR3 1016 aaKnown RBP11.98□□□□□ -0.49
TCOF1-211ENST00000513346 ATXN2Q99700 1313 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 PHF2O75151 1096 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 ITPK1Q13572 414 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 GEN1Q17RS7 908 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 ACBD5Q5T8D3 534 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 TTBK2Q6IQ55 1244 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 PPWD1Q96BP3 646 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 ANKFY1Q9P2R3 1169 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 UBTFL6P0CB48 400 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 APOBEC3FQ8IUX4 373 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 SYN2Q92777 582 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 NACC1Q96RE7 527 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 INTS13Q9NVM9 706 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 FAM47DPA6NHR8 397 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 TOM1L1O75674 476 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 TBC1D10BQ4KMP7 808 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 SPOUT1Q5T280 376 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 GLYCTKQ8IVS8 523 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 DCLRE1BQ9H816 532 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 MRPL47Q9HD33 250 aaKnown RBP11.97□□□□□ -0.49
TCOF1-211ENST00000513346 MAD1L1Q9Y6D9 718 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 PFASO15067 1338 aa11.97□□□□□ -0.49
TCOF1-211ENST00000513346 FOXP2O15409 715 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 CAND2O75155 1236 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 AP1G2O75843 785 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 EPHB1P54762 984 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 CREG2Q8IUH2 290 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 HAUS8Q9BT25 410 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 TRABDQ9H4I3 376 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 COPEO14579 308 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 FAM153BP0C7A2 387 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 NCF2P19878 526 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-211ENST00000513346 FAM153CQ494X1 144 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 LINC00116Q8NCU8 138 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 CDKL2Q92772 493 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 CEP170P1Q96L14 293 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 LBHD1Q9BQE6 289 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-211ENST00000513346 RGL1Q9NZL6 768 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-211ENST00000513346 FAM153AQ9UHL3 310 aa11.96□□□□□ -0.49
TCOF1-211ENST00000513346 FAM196BA6NMK8 535 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-211ENST00000513346 ACTN1P12814 892 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 PDE1BQ01064 536 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 SLC26A7Q8TE54 656 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 GINM1Q9NU53 330 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.5
TCOF1-211ENST00000513346 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-211ENST00000513346 ORC2Q13416 577 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-211ENST00000513346 TFDP1Q14186 410 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 MMEL1Q495T6 779 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 TMCO4Q5TGY1 634 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 CD302Q8IX05 232 aa11.96□□□□□ -0.5
TCOF1-211ENST00000513346 A0A0U1RQJ8 604 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 INO80B-WBP1J3KQ70 363 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 MEIS1O00470 390 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 KRT1P04264 644 aa11.95□□□□□ -0.5
TCOF1-211ENST00000513346 GALCP54803 685 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms