RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 RSAD1Q9HA92 442 aa17.81■□□□□ 0.44
PDLIM5-216ENST00000511767 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
PDLIM5-216ENST00000511767 TFIP11Q9UBB9 837 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-216ENST00000511767 PUF60Q9UHX1 559 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-216ENST00000511767 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
PDLIM5-216ENST00000511767 CCDC169A6NNP5 214 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 FSCN2O14926 492 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 B4GALT3O60512 393 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 ALDH2P05091 517 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 PRKCBP05771 671 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 GTF2F1P35269 517 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 DDIT3P35638 169 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 LTBRP36941 435 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 KRT17Q04695 432 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 ADAM15Q13444 863 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 PRPF4BQ13523 1007 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 KARSQ15046 597 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 GSTCDQ8NEC7 633 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 MICAL1Q8TDZ2 1067 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 PABPC5Q96DU9 382 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 GAD1Q99259 594 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 UBE2ZQ9H832 354 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 KCND2Q9NZV8 630 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 KCNG1Q9UIX4 513 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 NCOR1O75376 2440 aa17.8■□□□□ 0.44
PDLIM5-216ENST00000511767 NPHP3-ACAD11A0A0J9YXS1 232 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 ARL5CA6NH57 179 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 NPTXRO95502 500 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 POMCP01189 267 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 KCNQ1P51787 676 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 ADGRD2Q7Z7M1 963 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 SPIRE2Q8WWL2 714 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 PDZD7Q9H5P4 517 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 KMT5AQ9NQR1 393 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 ARHGAP28Q9P2N2 729 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 DNAJB4Q9UDY4 337 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 PCDHGC5Q9Y5F6 944 aa17.79■□□□□ 0.44
PDLIM5-216ENST00000511767 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 LIG1P18858 919 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 PLCG1P19174 1290 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 AKAP5P24588 427 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 PPM1AP35813 382 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 MCM6Q14566 821 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 LEXMQ3ZCV2 418 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 TAS1R3Q7RTX0 852 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 LINC00301Q8NCQ3 95 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 URGCPQ8TCY9 931 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 RAD54LQ92698 747 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 IGSF21Q96ID5 467 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 TRIM6Q9C030 488 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 NXF3Q9H4D5 531 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 IGFLR1Q9H665 355 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 PTPRHQ9HD43 1115 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-216ENST00000511767 VCANP13611 3396 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 N4BP3O15049 544 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 SLC16A4O15374 487 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 ZC3H11AO75152 810 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 CSPG5O95196 566 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 PLS3P13797 630 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 KCNA5P22460 613 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 SLC11A1P49279 550 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 DLX2Q07687 328 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 DMP1Q13316 513 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 GIT2Q14161 759 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 DHX8Q14562 1220 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 FOXD4L5Q5VV16 416 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 HACE1Q8IYU2 909 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 MRPL43Q8N983 215 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 FOXD4L4Q8WXT5 416 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 ZFP42Q96MM3 310 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 ACO2Q99798 780 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 APOL6Q9BWW8 343 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 TLE6Q9H808 572 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 TNFSF13BQ9Y275 285 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
PDLIM5-216ENST00000511767 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.43
PDLIM5-216ENST00000511767 KIAA1671Q9BY89 1806 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms