RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 KIFC3Q9BVG8 833 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 TIPINQ9BVW5 301 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 TMEM134Q9H6X4 195 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 RSAD1Q9HA92 442 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 TFIP11Q9UBB9 837 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 PUF60Q9UHX1 559 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
PDLIM5-212ENST00000509333 CCDC169A6NNP5 214 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 FSCN2O14926 492 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 B4GALT3O60512 393 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 ALDH2P05091 517 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 PRKCBP05771 671 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 GTF2F1P35269 517 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 DDIT3P35638 169 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 LTBRP36941 435 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 KRT17Q04695 432 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 ADAM15Q13444 863 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 PRPF4BQ13523 1007 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 KARSQ15046 597 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 GSTCDQ8NEC7 633 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 MICAL1Q8TDZ2 1067 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 PABPC5Q96DU9 382 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 GAD1Q99259 594 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 UBE2ZQ9H832 354 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 KCND2Q9NZV8 630 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 KCNG1Q9UIX4 513 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 NCOR1O75376 2440 aa17.8■□□□□ 0.44
PDLIM5-212ENST00000509333 NPHP3-ACAD11A0A0J9YXS1 232 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 ARL5CA6NH57 179 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 NPTXRO95502 500 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 POMCP01189 267 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 KCNQ1P51787 676 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 ADGRD2Q7Z7M1 963 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 SPIRE2Q8WWL2 714 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 PDZD7Q9H5P4 517 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 KMT5AQ9NQR1 393 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 ARHGAP28Q9P2N2 729 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 DNAJB4Q9UDY4 337 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 PCDHGC5Q9Y5F6 944 aa17.79■□□□□ 0.44
PDLIM5-212ENST00000509333 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 LIG1P18858 919 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 PLCG1P19174 1290 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 AKAP5P24588 427 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 PPM1AP35813 382 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 MCM6Q14566 821 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 LEXMQ3ZCV2 418 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 TAS1R3Q7RTX0 852 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 LINC00301Q8NCQ3 95 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 URGCPQ8TCY9 931 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 RAD54LQ92698 747 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 IGSF21Q96ID5 467 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 TRIM6Q9C030 488 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 NXF3Q9H4D5 531 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 IGFLR1Q9H665 355 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 PTPRHQ9HD43 1115 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-212ENST00000509333 VCANP13611 3396 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 N4BP3O15049 544 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC16A4O15374 487 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 ZC3H11AO75152 810 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 CSPG5O95196 566 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 PLS3P13797 630 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 KCNA5P22460 613 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 SLC11A1P49279 550 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 DLX2Q07687 328 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 DMP1Q13316 513 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 GIT2Q14161 759 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 DHX8Q14562 1220 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 FOXD4L5Q5VV16 416 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 HACE1Q8IYU2 909 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 MRPL43Q8N983 215 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 FOXD4L4Q8WXT5 416 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 ZFP42Q96MM3 310 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 ACO2Q99798 780 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 APOL6Q9BWW8 343 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 TLE6Q9H808 572 aa17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
PDLIM5-212ENST00000509333 TNFSF13BQ9Y275 285 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms