RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 SNRNP35Q16560 246 aaKnown RBP12.5□□□□□ -0.41
HDLBP-245ENST00000494862 DGKDQ16760 1214 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 C1orf220Q5T0J3 134 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 ZPBP2Q6X784 338 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 ZNF662Q6ZS27 426 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 USP37Q86T82 979 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 LRRC71Q8N4P6 559 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 EHBP1Q8NDI1 1231 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 CCDC42Q96M95 316 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 APBA2Q99767 749 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 INTS2Q9H0H0 1204 aaKnown RBP12.5□□□□□ -0.41
HDLBP-245ENST00000494862 AIPL1Q9NZN9 384 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
HDLBP-245ENST00000494862 REXO2Q9Y3B8 237 aaKnown RBP12.5□□□□□ -0.41
HDLBP-245ENST00000494862 ZNF233A6NK53 670 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 H3BRB1 525 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 TNPO2O14787 897 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 IPO7O95373 1038 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 IGHA2P01877 340 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 GTF2H1P32780 548 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 EIF4A3P38919 411 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 DLG4P78352 724 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 APBA1Q02410 837 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 POU5F1BQ06416 359 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 LINC01465Q8N7H1 131 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 SPAG5Q96R06 1193 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 CCDC113Q9H0I3 377 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
HDLBP-245ENST00000494862 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
HDLBP-245ENST00000494862 A0A0B4J269 797 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 A6NJR5 290 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-245ENST00000494862 TOMM70O94826 608 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 LCA5LO95447 670 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
HDLBP-245ENST00000494862 PRKCBP05771 671 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 ZNF286BP0CG31 522 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 RFX1P22670 979 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 KLRC1P26715 233 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 CYP2C19P33261 490 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 ARHGAP25P42331 645 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 GCLMP48507 274 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 MXI1P50539 228 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 CLCN3P51790 818 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 FCGRTP55899 365 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 JAM2P57087 298 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 SPA17Q15506 151 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 CCL14Q16627 93 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 ASTE1Q2TB18 679 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-245ENST00000494862 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 CYP4F22Q6NT55 531 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
HDLBP-245ENST00000494862 NFKBIZQ9BYH8 718 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 DEF6Q9H4E7 631 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 AGO2Q9UKV8 859 aaKnown RBP12.48□□□□□ -0.41
HDLBP-245ENST00000494862 Q9Y3F1 56 aa12.48□□□□□ -0.41
HDLBP-245ENST00000494862 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-245ENST00000494862 ADCY6O43306 1168 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 AKR1B10O60218 316 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 KIF5CO60282 957 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 MSCO60682 206 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 EDN1P05305 212 aa12.47□□□□□ -0.41
HDLBP-245ENST00000494862 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-245ENST00000494862 TMOD1P28289 359 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms