RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 APOL6Q9BWW8 343 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 NXF3Q9H4D5 531 aaKnown RBP13.05□□□□□ -0.32
MDC1-207ENST00000492462 MIOSQ9NXC5 875 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
MDC1-207ENST00000492462 LZTS1Q9Y250 596 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
MDC1-207ENST00000492462 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 NPTXRO95502 500 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 LIG1P18858 919 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 AXLP30530 894 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 ALDH7A1P49419 539 aaKnown RBP13.04□□□□□ -0.32
MDC1-207ENST00000492462 NDUFV1P49821 464 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
MDC1-207ENST00000492462 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.323e-8■■■□□ 15.3
MDC1-207ENST00000492462 DUSP6Q16828 381 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 KRT79Q5XKE5 535 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 FAM178BQ8IXR5 827 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 DAW1Q8N136 415 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 CCDC113Q9H0I3 377 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 FZD8Q9H461 694 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 ENTPD7Q9NQZ7 604 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
MDC1-207ENST00000492462 PUF60Q9UHX1 559 aaKnown RBP13.04□□□□□ -0.32
MDC1-207ENST00000492462 ARL5CA6NH57 179 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 MBTPS2O43462 519 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 EYA4O95677 639 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 AKAP5P24588 427 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 MLH1P40692 756 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 SCNN1GP51170 649 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 KRT17Q04695 432 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 GRIN1Q05586 938 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 MAPK7Q13164 816 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 ZBTB8OSQ8IWT0 167 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 CXCL16Q9H2A7 254 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 GTF3C3Q9Y5Q9 886 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
MDC1-207ENST00000492462 MYH11P35749 1972 aa13.02□□□□□ -0.32
MDC1-207ENST00000492462 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
MDC1-207ENST00000492462 C2orf71A6NGG8 1288 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 F8W810 466 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 HIP1RO75146 1068 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 PRKCBP05771 671 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 NAMPTP43490 491 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 SMAD4Q13485 552 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 KCNC3Q14003 757 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 PDE12Q6L8Q7 609 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 SLC27A1Q6PCB7 646 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 VPS52Q8N1B4 723 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 MRPL43Q8N983 215 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 GSTCDQ8NEC7 633 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 DEPTORQ8TB45 409 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 C2orf40Q9H1Z8 148 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
MDC1-207ENST00000492462 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 KLK14Q9P0G3 267 aa13.02□□□□□ -0.33
MDC1-207ENST00000492462 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 NRP1O14786 923 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 INPPL1O15357 1258 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 CXCL14O95715 111 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 SSBP05455 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
MDC1-207ENST00000492462 SYT1P21579 422 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 PEX3P56589 373 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 ZP2Q05996 745 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 RAD51AP2Q09MP3 1159 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 RESTQ13127 1097 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 PRPF4BQ13523 1007 aaKnown RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 SMC1AQ14683 1233 aaKnown RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 MAPK6Q16659 721 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 TMEM119Q4V9L6 283 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms