RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZNF215Q9UL58 517 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-213ENST00000480102 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 KIF3AQ9Y496 699 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
PTCD3-213ENST00000480102 MYH8P13535 1937 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 A0A1W2PP55 124 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 MBLAC1A4D2B0 266 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 TRIM43BA6NCK2 446 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 RRN3P2A6NIE6 340 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 DDX3YO15523 660 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 DHX15O43143 795 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 BAIAP3O94812 1187 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 GGPS1O95749 300 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 CXCL10P02778 98 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 RXRAP19793 462 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 MAGEA10P43363 369 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 TRAPPC10P48553 1259 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 NEK4P51957 841 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 AK2P54819 239 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 CDC42EP1Q00587 391 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SP2Q02086 613 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SCRN1Q12765 414 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 NPY5RQ15761 445 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 LY6KQ17RY6 165 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 HSDL1Q3SXM5 330 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SEPT14Q6ZU15 432 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 ACAD11Q709F0 780 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 NOL8Q76FK4 1167 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SERINC5Q86VE9 423 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 EXOC8Q8IYI6 725 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 RPUSD2Q8IZ73 545 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 USP38Q8NB14 1042 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 IL31RAQ8NI17 732 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 PHOSPHO2Q8TCD6 241 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 UBASH3BQ8TF42 649 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 AFG1LQ8WV93 481 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 LENG9Q96B70 501 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 TRIM43Q96BQ3 446 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 ALKBH8Q96BT7 664 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 FAM20AQ96MK3 541 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 TBC1D32Q96NH3 1257 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 KIF2CQ99661 725 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 PHF20Q9BVI0 1012 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 NOC4LQ9BVI4 516 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 MTIF3Q9H2K0 278 aaKnown RBP5.55□□□□□ -1.52
PTCD3-213ENST00000480102 SMARCAD1Q9H4L7 1026 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 MLXIPQ9HAP2 919 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 BRMS1Q9HCU9 246 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 LIMCH1Q9UPQ0 1083 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 ZSWIM8A7E2V4 1837 aa5.55□□□□□ -1.52
PTCD3-213ENST00000480102 KDM3AQ9Y4C1 1321 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 METTL12A8MUP2 240 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 FAM86B1E9PN63 330 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 IPO5O00410 1097 aaKnown RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 NOP56O00567 594 aaKnown RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 CTDNEP1O95476 244 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 FAM86B2P0C5J1 330 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 RAG1P15918 1043 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 GLB1P16278 677 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 MUTP22033 750 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 ARL4DP49703 201 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 FPGSQ05932 587 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 C19orf57Q0VDD7 668 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 IKBKEQ14164 716 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 ME3Q16798 604 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 PRSS36Q5K4E3 855 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 EEPD1Q7L9B9 569 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 CCNJLQ8IV13 435 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 C7orf61Q8IZ16 206 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 NME8Q8N427 588 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 NSUN7Q8NE18 718 aaKnown RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 HERVK_113Q902F9 699 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 SLC5A5Q92911 643 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 TCEANC2Q96MN5 208 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 CTAGE1Q96RT6 745 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 TCF12Q99081 682 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 SDF4Q9BRK5 362 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 SLC26A6Q9BXS9 759 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 NIF3L1Q9GZT8 377 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 DNAJC25Q9H1X3 360 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 FOXP1Q9H334 677 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 HIPK3Q9H422 1215 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 SOX17Q9H6I2 414 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 LIN7BQ9HAP6 207 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 AGO4Q9HCK5 861 aaKnown RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 NPHS2Q9NP85 383 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 KCNMB3Q9NPA1 279 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 IL23AQ9NPF7 189 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 SLC9A2Q9UBY0 812 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 DCTN4Q9UJW0 460 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 ATP11BQ9Y2G3 1177 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 MORC2Q9Y6X9 1032 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-213ENST00000480102 DNAH12Q6ZR08 3092 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms