RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 KIFC3Q9BVG8 833 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 TBC1D13Q9NVG8 400 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 SPG21Q9NZD8 308 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 ARHGAP28Q9P2N2 729 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 PUF60Q9UHX1 559 aaKnown RBP14.8□□□□□ -0.04
ACTN4-205ENST00000477174 COG5Q9UP83 839 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 LZTS1Q9Y250 596 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 GIT1Q9Y2X7 761 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 ARID2Q68CP9 1835 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 H0YCG3 227 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 NCK2O43639 380 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 RNASELQ05823 741 aaKnown RBP14.79□□□□□ -0.04
ACTN4-205ENST00000477174 RAD51AP2Q09MP3 1159 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 MCM6Q14566 821 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 SKIV2LQ15477 1246 aaKnown RBP14.79□□□□□ -0.04
ACTN4-205ENST00000477174 TMEM132AQ24JP5 1023 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 PDE12Q6L8Q7 609 aaKnown RBP14.79□□□□□ -0.04
ACTN4-205ENST00000477174 CCDC73Q6ZRK6 1079 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
ACTN4-205ENST00000477174 GPBP1Q86WP2 473 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 KCNG4Q8TDN1 519 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 LRRC15Q8TF66 581 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 POF1BQ8WVV4 589 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 KCNN1Q92952 543 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 ADPGKQ9BRR6 497 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 NSUN3Q9H649 340 aaKnown RBP14.79□□□□□ -0.04
ACTN4-205ENST00000477174 HCSTQ9UBK5 93 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 INPP5FQ9Y2H2 1132 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 UNC80Q8N2C7 3258 aa14.79□□□□□ -0.04
ACTN4-205ENST00000477174 NPHP3-ACAD11A0A0J9YXS1 232 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 ARL5CA6NH57 179 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 TTLL13PA6NNM8 815 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 CUTAO60888 179 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 NPTXRO95502 500 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 BRD1O95696 1058 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 LIG1P18858 919 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 DNAJB1P25685 340 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 BCAR1P56945 870 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 GIT2Q14161 759 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 DHX8Q14562 1220 aaKnown RBP14.78□□□□□ -0.04
ACTN4-205ENST00000477174 NT5DC1Q5TFE4 455 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 ATF7IP2Q5U623 682 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 CDR2LQ86X02 465 aaPredicted RBP14.78□□□□□ -0.04
ACTN4-205ENST00000477174 TMEM161BQ8NDZ6 487 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
ACTN4-205ENST00000477174 HLA-CQ95604 372 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 REEP2Q9BRK0 252 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 MRPL4Q9BYD3 311 aaKnown RBP14.78□□□□□ -0.04
ACTN4-205ENST00000477174 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 THEGQ9P2T0 379 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 TNFSF13BQ9Y275 285 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 HES2Q9Y543 173 aa14.78□□□□□ -0.04
ACTN4-205ENST00000477174 ZMYM2Q9UBW7 1377 aa14.77□□□□□ -0.04
ACTN4-205ENST00000477174 SLC16A4O15374 487 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 ALDH2P05091 517 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 KRT18P05783 430 aaKnown RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 GALTP07902 379 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 AFF1P51825 1210 aaKnown RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 ZNF131P52739 623 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 MRPS5P82675 430 aaKnown RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 STRN3Q13033 797 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 AAK1Q2M2I8 961 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 DCAF4L1Q3SXM0 396 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 FOXD4L6Q3SYB3 417 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 TCEAL5Q5H9L2 206 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 FOXD4L3Q6VB84 417 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 SV2BQ7L1I2 683 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 ZNF280BQ86YH2 543 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 PPP2R3CQ969Q6 453 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 FAM193BQ96PV7 902 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 GAD1Q99259 594 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 ACO2Q99798 780 aaKnown RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 PANK2Q9BZ23 570 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.05
ACTN4-205ENST00000477174 PARVGQ9HBI0 331 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 TLR9Q9NR96 1032 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 RCOR1Q9UKL0 485 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 ZDHHC9Q9Y397 364 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 REV3LO60673 3130 aa14.77□□□□□ -0.05
ACTN4-205ENST00000477174 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-205ENST00000477174 ZC3H11AO75152 810 aaKnown RBP eCLIP14.76□□□□□ -0.05
ACTN4-205ENST00000477174 FAM13AO94988 1023 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 POMCP01189 267 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 MAPTP10636 758 aaKnown RBP14.76□□□□□ -0.05
ACTN4-205ENST00000477174 AKAP5P24588 427 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 ABCD1P33897 745 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-205ENST00000477174 COL19A1Q14993 1142 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 AXDND1Q5T1B0 1012 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-205ENST00000477174 TAS1R3Q7RTX0 852 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 MYCT1Q8N699 235 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 MICAL1Q8TDZ2 1067 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 ASB2Q96Q27 587 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 TMEM175Q9BSA9 504 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
ACTN4-205ENST00000477174 PTPRHQ9HD43 1115 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms