RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	EXTL3	O43909	919 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	IGHA2	P01877	340 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	PRKCB	P05771	671 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	GJB1	P08034	283 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	PLEK	P08567	350 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	KLRC1	P26715	233 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	PSMC4	P43686	418 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	GCLM	P48507	274 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	LACTB	P83111	547 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ENPEP	Q07075	957 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	PPP3CA	Q08209	521 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	CETN1	Q12798	172 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	MAPK6	Q16659	721 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	IQCE	Q6IPM2	695 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZPBP2	Q6X784	338 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	GPIHBP1	Q8IV16	184 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	LINC01465	Q8N7H1	131 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	TMC2	Q8TDI7	906 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZNF592	Q92610	1267 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	CCDC127	Q96BQ5	260 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	MFSD14A	Q96MC6	490 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	SPAG5	Q96R06	1193 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	MSTO1	Q9BUK6	570 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	KIAA1586	Q9HCI6	787 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ARHGAP20	Q9P2F6	1191 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	AGO2	Q9UKV8	859 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	MYO6	Q9UM54	1294 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	USP20	Q9Y2K6	914 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	REXO2	Q9Y3B8	237 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	DAAM1	Q9Y4D1	1078 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	THSD7B	Q9C0I4	1608 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZNF233	A6NK53	670 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	EIF3CL	B5ME19	914 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	TULP1	O00294	542 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	MSC	O60682	206 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	IPO7	O95373	1038 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	F2	P00734	622 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	TUBB4A	P04350	444 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	SERPING1	P05155	500 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	AKR1A1	P14550	325 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	CPT1A	P50416	773 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	KIF11	P52732	1056 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	JAM2	P57087	298 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	MCCD1	P59942	119 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	DEFB115	Q30KQ5	88 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	SLC9C1	Q4G0N8	1177 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	EPC2	Q52LR7	807 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	TDRD12	Q587J7	1177 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	GJB7	Q6PEY0	223 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	MTHFD1L	Q6UB35	978 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	REM2	Q8IYK8	340 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	PARD3B	Q8TEW8	1205 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZNF668	Q96K58	619 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZBTB45	Q96K62	511 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	CCDC42	Q96M95	316 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	EIF3C	Q99613	913 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	HAPLN2	Q9GZV7	340 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	TMEM117	Q9H0C3	514 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	AP5M1	Q9H0R1	490 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	DEF6	Q9H4E7	631 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	LZTFL1	Q9NQ48	299 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	GABRQ	Q9UN88	632 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435	AKT3	Q9Y243	479 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435		Q9Y3F1	56 aa		13.36	□□□□□ -0.27
HDLBP-231	ENST00000467435		A0A0B4J269	797 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435		A0A0U1RQJ8	604 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	SSU72P8	A0A1W2PR75	194 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	INO80B-WBP1	J3KQ70	363 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	PMM2	O15305	246 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	TBC1D8	O95759	1140 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	LDHA	P00338	332 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	HARS	P12081	509 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	RFX1	P22670	979 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	TMOD1	P28289	359 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	EIF4A3	P38919	411 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	PHKA2	P46019	1235 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	NLRP11	P59045	1033 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	PTEN	P60484	403 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	KRT83	P78385	493 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	MBTD1	Q05BQ5	628 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	MFSD10	Q14728	455 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	PSMD6	Q15008	389 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	ARHGAP29	Q52LW3	1261 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	HGSNAT	Q68CP4	663 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	SYT10	Q6XYQ8	523 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	KIAA1328	Q86T90	577 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	EHBP1	Q8NDI1	1231 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	ATRIP	Q8WXE1	791 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	TRIB2	Q92519	343 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	MAP7D2	Q96T17	732 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	NFKBIZ	Q9BYH8	718 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	INO80B	Q9C086	356 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	TMEM8A	Q9HCN3	771 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	CREBZF	Q9NS37	354 aa		13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-231	ENST00000467435	AIPL1	Q9NZN9	384 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms