RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 POMCP01189 267 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 PLA2G4BP0C869 781 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 SYT1P21579 422 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 MLH1P40692 756 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 TOB1P50616 345 aaPredicted RBP9.85□□□□□ -0.83
DDX39B-216ENST00000462421 TFF2Q03403 129 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 CEBPZQ03701 1054 aaKnown RBP9.85□□□□□ -0.83
DDX39B-216ENST00000462421 GRIK3Q13003 919 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 CLLU1OSQ5K130 101 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 ATF7IP2Q5U623 682 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 SPRED2Q7Z698 418 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 SPPL3Q8TCT6 385 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 SNX21Q969T3 373 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 PLIN2Q99541 437 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
DDX39B-216ENST00000462421 MRPL17Q9NRX2 175 aaKnown RBP9.85□□□□□ -0.83
DDX39B-216ENST00000462421 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 CD207Q9UJ71 328 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 ATP6V1DQ9Y5K8 247 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.85□□□□□ -0.83
DDX39B-216ENST00000462421 GBF1Q92538 1859 aa9.85□□□□□ -0.83
DDX39B-216ENST00000462421 PP2D1A8MPX8 630 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 H3BQ06 376 aaPredicted RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 TADA2AO75478 443 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 OFD1O75665 1012 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 CXCL14O95715 111 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ARF4P18085 180 aaPredicted RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 STAT6P42226 847 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 LIG4P49917 911 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ELAVL2Q12926 359 aaKnown RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 KYAT1Q16773 422 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 FAM187BQ17R55 369 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ZNF568Q3ZCX4 644 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 CDCA2Q69YH5 1023 aaPredicted RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 PDXDC1Q6P996 788 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 CCDC73Q6ZRK6 1079 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 STXBP4Q6ZWJ1 553 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ZNF598Q86UK7 904 aaKnown RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 GPBP1Q86WP2 473 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 VPS52Q8N1B4 723 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 MYCT1Q8N699 235 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 CCDC34Q96HJ3 373 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 PYM1Q9BRP8 204 aaKnown RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 CWH43Q9H720 699 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 MINDY3Q9H8M7 445 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 SLC38A7Q9NVC3 462 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 DZANK1Q9NVP4 752 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ODF2LQ9ULJ1 636 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 PRG3Q9Y2Y8 225 aaPredicted RBP9.84□□□□□ -0.83
DDX39B-216ENST00000462421 ZMYM2Q9UBW7 1377 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 SIP14410 1827 aa9.84□□□□□ -0.83
DDX39B-216ENST00000462421 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 A0A1B0GUA9 196 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 ARL5CA6NH57 179 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 K7ENM7 598 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 XPOTO43592 962 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 TRAPPC3O43617 180 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 THP07101 528 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 ADH1AP07327 375 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 HARSP12081 509 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 PLS3P13797 630 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 HOXB8P17481 243 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 KLRC2P26717 231 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 CDC25AP30304 524 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 PBX3P40426 434 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 SCNN1GP51170 649 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 KCNQ1P51787 676 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 AMPD3Q01432 767 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 RAD51AP2Q09MP3 1159 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 SMAD4Q13485 552 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 CLUL1Q15846 466 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 RINT1Q6NUQ1 792 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 LLGL2Q6P1M3 1020 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 MRPL10Q7Z7H8 261 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 ZBTB33Q86T24 672 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 DDX53Q86TM3 631 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 SLC39A11Q8N1S5 342 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 C4orf32Q8N8J7 132 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 SYT2Q8N9I0 419 aaPredicted RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 IGSF21Q96ID5 467 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 GAD1Q99259 594 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 NXF3Q9H4D5 531 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 PARVGQ9HBI0 331 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 PRKAG3Q9UGI9 489 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 CFAP45Q9UL16 551 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 GDAQ9Y2T3 454 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 R3HCC1Q9Y3T6 440 aaKnown RBP9.83□□□□□ -0.84
DDX39B-216ENST00000462421 RALGAPA2Q2PPJ7 1873 aa9.83□□□□□ -0.84
DDX39B-216ENST00000462421 SF3B1O75533 1304 aaKnown RBP eCLIP9.82□□□□□ -0.847e-8■■■■■ 30.2
DDX39B-216ENST00000462421 NT5C1B-RDH14C9J2C7 533 aa9.82□□□□□ -0.84
DDX39B-216ENST00000462421 B4GALT5O43286 388 aa9.82□□□□□ -0.84
DDX39B-216ENST00000462421 AKAP5P24588 427 aa9.82□□□□□ -0.84
DDX39B-216ENST00000462421 MARCKSP29966 332 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms