RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HOXA2O43364 376 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 PHACTR2O75167 634 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 ADAMTS4O75173 837 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 SYF2O95926 243 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 RPN1P04843 607 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 PFKMP08237 780 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CD52P31358 61 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 AFMP43652 599 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 VSNL1P62760 191 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CDK17Q00537 523 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 HABP4Q5JVS0 413 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMEM63BQ5T3F8 832 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 GOLGA1Q92805 767 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 BLZF1Q9H2G9 400 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 POLD4Q9HCU8 107 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 PDLIM7Q9NR12 457 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 GTF2IRD1Q9UHL9 959 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 KDM3AQ9Y4C1 1321 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 LRRIQ3A6PVS8 624 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 FAM86B1E9PN63 330 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 N4BP1O75113 896 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 OAS2P29728 719 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRPHP41219 470 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 LIG4P49917 911 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 ARPP19P56211 112 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 STX17P56962 302 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CAP1Q01518 475 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 ASTE1Q2TB18 679 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF618Q5T7W0 954 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMCO3Q6UWJ1 677 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 DYMQ7RTS9 669 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CNGA4Q8IV77 575 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TEX2Q8IWB9 1127 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 NEK9Q8TD19 979 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 LMBR1Q8WVP7 490 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 EIF2AK1Q9BQI3 630 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.04□□□□□ -1.121e-7■■□□□ 12.9
CDC42BPA-208ENST00000442054 KMT5AQ9NQR1 393 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 SRGAP2BP0DMP2 458 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 MRPS6P82932 125 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CEP57Q86XR8 500 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMTC1Q8IUR5 882 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 CRISPLD2Q9H0B8 497 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 ENTPD7Q9NQZ7 604 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRIM49BA6NDI0 452 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 KCNJ18B7U540 433 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 AGPSO00116 658 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 ELF1P32519 619 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 KCNJ12Q14500 433 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 HERC4Q5GLZ8 1057 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 FIGNQ5HY92 759 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 HS2ST1Q7LGA3 356 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 GPBP1Q86WP2 473 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 RDM1Q8NG50 284 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 STAMQ92783 540 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 CELF4Q9BZC1 486 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 UNC45AQ9H3U1 944 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 THAP9Q9H5L6 903 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 PDE2AO00408 941 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 STIM1Q13586 685 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 PADI6Q6TGC4 694 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCDC60Q8IWA6 550 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 NELFBQ8WX92 580 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 EXOC4Q96A65 974 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 FTHL17Q9BXU8 183 aa8.03□□□□□ -1.12
CDC42BPA-208ENST00000442054 ABHD14A-ACY1A0A1B0GW23 586 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 PP2D1A8MPX8 630 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 DGAT1O75907 488 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 NDUFA10O95299 355 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 MYL1P05976 194 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 ICAM3P32942 547 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 RABGGTBP53611 331 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 PEX3P56589 373 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 PAK1Q13153 545 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRIM14Q14142 442 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 NIPA1Q7RTP0 329 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 MTMR9Q96QG7 549 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 POLR3FQ9H1D9 316 aaPredicted RBP8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRDM12Q9H4Q4 367 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 ADAM21Q9UKJ8 722 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 SIK3Q9Y2K2 1263 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 COL4A3BPQ9Y5P4 624 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 MYH10P35580 1976 aa8.02□□□□□ -1.12
CDC42BPA-208ENST00000442054 A0A087WZ62 844 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 A0A1W2PQJ5 194 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 H0YCG3 227 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 ASAP2O43150 1006 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZC3H11AO75152 810 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 CST5P28325 142 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 OR1G1P47890 313 aa8.02□□□□□ -1.13
CDC42BPA-208ENST00000442054 FAAP100Q0VG06 881 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms