RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 PIGSQ96S52 555 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 NUMBLQ9Y6R0 609 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 LAMA5O15230 3695 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 UNC79Q9P2D8 2635 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 COL4A2P08572 1712 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 CCDC195A0A1B0GUA6 201 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 KCNK5O95279 499 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 LAMP2P13473 410 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 ITGB5P18084 799 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 KLRC2P26717 231 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 POLGP54098 1239 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 GUCY1B3Q02153 619 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 GIT2Q14161 759 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 NPY5RQ15761 445 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 SOWAHCQ53LP3 525 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 FAM177A1Q8N128 213 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 CELF5Q8N6W0 485 aaKnown RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 ZCCHC14Q8WYQ9 949 aaKnown RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 IGSF21Q96ID5 467 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 FAM126AQ9BYI3 521 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 LTB4R2Q9NPC1 389 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 PRMT8Q9NR22 394 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-211ENST00000429899 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
ATG4B-211ENST00000429899 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 H3BQV1 296 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 TM4SF5O14894 197 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 RFPL2O75678 378 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 MAGEA9P43362 315 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 SLC44A4Q53GD3 710 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ODR4Q5SWX8 454 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 PSAPL1Q6NUJ1 521 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 FAM43BQ6ZT52 329 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 GET4Q7L5D6 327 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 CMASQ8NFW8 434 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 FGF14Q92915 247 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 RRP36Q96EU6 259 aaKnown RBP11.31□□□□□ -0.6
ATG4B-211ENST00000429899 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 TCHHQ07283 1943 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 F5P12259 2224 aa11.31□□□□□ -0.6
ATG4B-211ENST00000429899 INPPL1O15357 1258 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 B4GALT3O60512 393 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 LILRB3O75022 631 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 GPR32O75388 356 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 BAG4O95429 457 aaKnown RBP11.3□□□□□ -0.6
ATG4B-211ENST00000429899 VTNP04004 478 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 TDGF1P13385 188 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-211ENST00000429899 PRKCQQ04759 706 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 MTAPQ13126 283 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 SIM2Q14190 667 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-211ENST00000429899 SF3A2Q15428 464 aaKnown RBP11.3□□□□□ -0.6
ATG4B-211ENST00000429899 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-211ENST00000429899 NRDE2Q9H7Z3 1164 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 DNAJB4Q9UDY4 337 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
ATG4B-211ENST00000429899 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 ZBTB42B2RXF5 422 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 MEIS2O14770 477 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 TOP3BO95985 862 aaKnown RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 GALTP07902 379 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 STAT5BP51692 787 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 LIMK1P53667 647 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 NRLP54845 237 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 FZD5Q13467 585 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 TRIM29Q14134 588 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 PARM1Q6UWI2 310 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 DAGLBQ8NCG7 672 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms