RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TTLL13PA6NNM8 815 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 FANCGO15287 622 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 MSCO60682 206 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 GJB1P08034 283 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 CLCN3P51790 818 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 GPIHBP1Q8IV16 184 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 GPD1LQ8N335 351 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 PARD3BQ8TEW8 1205 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 TARS2Q9BW92 718 aaKnown RBP22.81■■□□□ 1.24
GPC1-202ENST00000420138 NUCKS1Q9H1E3 243 aaKnown RBP22.81■■□□□ 1.24
GPC1-202ENST00000420138 AIPL1Q9NZN9 384 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 PCNTO95613 3336 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 CASP8AP2Q9UKL3 1982 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 MYL7Q01449 175 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 KIF22Q14807 665 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 ASTE1Q2TB18 679 aaPredicted RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 GJB7Q6PEY0 223 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 RNF149Q8NC42 400 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 ZBTB45Q96K62 511 aaPredicted RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 COL1A2P08123 1366 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 EIF3CLB5ME19 914 aaKnown RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 ZNF263O14978 683 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 PMM2O15305 246 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 DYNC1LI2O43237 492 aaPredicted RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 ABL1P00519 1130 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 SRGAP2CP0DJJ0 459 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 KLRC1P26715 233 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 ARHGAP25P42331 645 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 GCLMP48507 274 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 EFNA5P52803 228 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 ETF1P62495 437 aaKnown RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 IGBP1P78318 339 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 RBM10P98175 930 aaKnown RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 CYP24A1Q07973 514 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 DGKDQ16760 1214 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 RHPN2Q8IUC4 686 aa22.8■■□□□ 1.24
GPC1-202ENST00000420138 EIF3CQ99613 913 aaKnown RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 ZNF215Q9UL58 517 aaPredicted RBP22.8■■□□□ 1.24
GPC1-202ENST00000420138 LRRIQ3A6PVS8 624 aaPredicted RBP22.79■■□□□ 1.24
GPC1-202ENST00000420138 P4HA2O15460 535 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 JAM2P57087 298 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 IRX5P78411 483 aaPredicted RBP22.79■■□□□ 1.24
GPC1-202ENST00000420138 EPC2Q52LR7 807 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 SFMBT2Q5VUG0 894 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 IQCEQ6IPM2 695 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 CRELD2Q6UXH1 353 aaPredicted RBP22.79■■□□□ 1.24
GPC1-202ENST00000420138 TMC2Q8TDI7 906 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 FAM213AQ9BRX8 229 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 TMEM117Q9H0C3 514 aa22.79■■□□□ 1.24
GPC1-202ENST00000420138 INTS2Q9H0H0 1204 aaKnown RBP22.79■■□□□ 1.24
GPC1-202ENST00000420138 A0A0B4J269 797 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 EXTL3O43909 919 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 LRRN2O75325 713 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 CYLC1P35663 651 aaPredicted RBP22.78■■□□□ 1.24
GPC1-202ENST00000420138 EIF4A3P38919 411 aaKnown RBP22.78■■□□□ 1.24
GPC1-202ENST00000420138 MAPK8IP2Q13387 824 aaPredicted RBP22.78■■□□□ 1.24
GPC1-202ENST00000420138 MARCH8Q5T0T0 291 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 METTL13Q8N6R0 699 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 EHBP1Q8NDI1 1231 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 TSC1Q92574 1164 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 MAGEB2O15479 319 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 LCA5LO95447 670 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 ENPEPQ07075 957 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 RAPGEF1Q13905 1077 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 ZPBP2Q6X784 338 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 SYT10Q6XYQ8 523 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 IRF2BP2Q7Z5L9 587 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 CCDC127Q96BQ5 260 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 CCDC42Q96M95 316 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 POP1Q99575 1024 aaKnown RBP22.78■■□□□ 1.24
GPC1-202ENST00000420138 LZTFL1Q9NQ48 299 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 MYO6Q9UM54 1294 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 GABRQQ9UN88 632 aa22.78■■□□□ 1.24
GPC1-202ENST00000420138 SSU72P8A0A1W2PR75 194 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 KIAA0391O15091 583 aaKnown RBP22.77■■□□□ 1.24
GPC1-202ENST00000420138 FLT3LGP49771 235 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 WNT7BP56706 349 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 NLRP11P59045 1033 aaKnown RBP22.77■■□□□ 1.24
GPC1-202ENST00000420138 SLFN12LQ6IEE8 588 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 MTHFD1LQ6UB35 978 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 TLK2Q86UE8 772 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 KAT2BQ92831 832 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 ZNF668Q96K58 619 aaPredicted RBP22.77■■□□□ 1.24
GPC1-202ENST00000420138 IRX2Q9BZI1 471 aaPredicted RBP22.77■■□□□ 1.24
GPC1-202ENST00000420138 FZD8Q9H461 694 aa22.77■■□□□ 1.24
GPC1-202ENST00000420138 AGO2Q9UKV8 859 aaKnown RBP22.77■■□□□ 1.24
GPC1-202ENST00000420138 ABLIM1O14639 778 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 ASAP2O43150 1006 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 N4BP1O75113 896 aaKnown RBP22.76■■□□□ 1.23
GPC1-202ENST00000420138 SERPING1P05155 500 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 PTENP60484 403 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 CAP1Q01518 475 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 ZBTB41Q5SVQ8 909 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 PHLDB3Q6NSJ2 640 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 NLRP4Q96MN2 994 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 GPR88Q9GZN0 384 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 C2orf40Q9H1Z8 148 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 KIAA1586Q9HCI6 787 aa22.76■■□□□ 1.23
GPC1-202ENST00000420138 TOPORSQ9NS56 1045 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms