RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MKS1Q9NXB0 559 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 PUF60Q9UHX1 559 aaKnown RBP6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZBTB21Q9ULJ3 1066 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 TSC22D4Q9Y3Q8 395 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 PPP2R3BQ9Y5P8 575 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 CDC14BO60729 498 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 H2AFYO75367 372 aaKnown RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 HNRNPLP14866 589 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 VCAM1P19320 739 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 SCAND1P57086 179 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 ACAP1Q15027 740 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 PDCD1Q15116 288 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 VPS72Q15906 364 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 TIGD7Q6NT04 549 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 MAMDC4Q6UXC1 1216 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 KSR2Q6VAB6 950 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 ADGRE4PQ86SQ3 457 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 PNMA8AQ86V59 439 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 RPGRQ92834 1020 aaKnown RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 LPPQ93052 612 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 GFM2Q969S9 779 aaKnown RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLC7A6OSQ96CW6 309 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 CLIP3Q96DZ5 547 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 HSPBAP1Q96EW2 488 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 WDR92Q96MX6 357 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 FDXACB1Q9BRP7 624 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 SARGQ9BW04 601 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 OSBPL6Q9BZF3 934 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 DNAI1Q9UI46 699 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 MRFAP1Q9Y605 127 aa6.34□□□□□ -1.39
HMGB1P13-201ENST00000406019 MYPNQ86TC9 1320 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 PRSS38A1L453 326 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 KLHL33A6NCF5 533 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 GOLGA8AA7E2F4 631 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 GOLGA8BA8MQT2 603 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 ERC2O15083 957 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 ATP2C1P98194 919 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 FOXL1Q12952 345 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 RIN1Q13671 783 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 CYB5RLQ6IPT4 315 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 PPP4R4Q6NUP7 873 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 ESPNLQ6ZVH7 1005 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 EDAQ92838 391 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 RUNDC1Q96C34 613 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 MPHOSPH6Q99547 160 aaKnown RBP6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 SLC6A15Q9H2J7 730 aa6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 NOC2LQ9Y3T9 749 aaKnown RBP6.33□□□□□ -1.4
HMGB1P13-201ENST00000406019 OS9Q13438 667 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 GALEQ14376 348 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 ZNF585AQ6P3V2 769 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 B3GNT9Q6UX72 402 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 POLNQ7Z5Q5 900 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 GIMAP8Q8ND71 665 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 SHCBP1Q8NEM2 672 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 TIFAQ96CG3 184 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 NELFAQ9H3P2 528 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 CCM2LQ9NUG4 571 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 MYRFQ9Y2G1 1151 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 TESMINQ9Y4I5 508 aa6.32□□□□□ -1.4
HMGB1P13-201ENST00000406019 MATN3O15232 486 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 KDM1AO60341 852 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 PCDH8O95206 1070 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 APOL3O95236 402 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 LDHAP00338 332 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 GAAP10253 952 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 TNFRSF1AP19438 455 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 TRIM25Q14258 630 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 GRM3Q14832 879 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 RRP12Q5JTH9 1297 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 EFCAB2Q5VUJ9 269 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 AMOTL1Q8IY63 956 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 TEKT5Q96M29 485 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 ACAP3Q96P50 834 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 NOL10Q9BSC4 688 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 SLC12A5Q9H2X9 1139 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 NUMBLQ9Y6R0 609 aa6.31□□□□□ -1.4
HMGB1P13-201ENST00000406019 PLSCR1O15162 318 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 MTSS1O43312 755 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 IL33O95760 270 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 COMTP21964 271 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 AKAP5P24588 427 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 BRD3Q15059 726 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 LONRF3Q496Y0 759 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 PITRM1Q5JRX3 1037 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms