RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TMEM174Q8WUU8 243 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ELMO3Q96BJ8 720 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 HVCN1Q96D96 273 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 AKR1B10O60218 316 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 RFC5P40937 340 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 IRF5Q13568 498 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 PRAMEF19Q5SWL8 479 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 DEPTORQ8TB45 409 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 SPAG5Q96R06 1193 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 INTS2Q9H0H0 1204 aaKnown RBP16.44■□□□□ 0.22
COL25A1-201ENST00000399126 VTA1Q9NP79 307 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 URI1O94763 535 aaPredicted RBP16.44■□□□□ 0.22
COL25A1-201ENST00000399126 NAMPTP43490 491 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 GTF2A1P52655 376 aaPredicted RBP16.44■□□□□ 0.22
COL25A1-201ENST00000399126 SLC35F6Q8N357 371 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 LMO3Q8TAP4 145 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 MYH10P35580 1976 aa16.44■□□□□ 0.22
COL25A1-201ENST00000399126 KIF5CO60282 957 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 LGALS2P05162 132 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 SMPD1P17405 629 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 CASQ1P31415 396 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 IGBP1P78318 339 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 FAM167AQ96KS9 214 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 HAUS4Q9H6D7 363 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 V9GYY5 206 aaPredicted RBP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 SERPING1P05155 500 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 MAPK4P31152 587 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 LIG4P49917 911 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 WNT7BP56706 349 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 JAM2P57087 298 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 BRDTQ58F21 947 aaPredicted RBP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 ZBTB41Q5SVQ8 909 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 DNAAF5Q86Y56 855 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 JAKMIP2Q96AA8 810 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 TARS2Q9BW92 718 aaKnown RBP16.43■□□□□ 0.22
COL25A1-201ENST00000399126 TMEM117Q9H0C3 514 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 FLRT1Q9NZU1 646 aa16.43■□□□□ 0.22
COL25A1-201ENST00000399126 K7ERI5 159 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 GH1P01241 217 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 TFRCP02786 760 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 CLCN3P51790 818 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 KRT83P78385 493 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 GRM1Q13255 1194 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ASIC2Q16515 512 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ANKFY1Q9P2R3 1169 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 PCDHA13Q9Y5I0 950 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 RBM47A0AV96 593 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 FAM170AA1A519 330 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 LRRIQ3A6PVS8 624 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ACOT2P49753 483 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 PTK2Q05397 1052 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 STRN3Q13033 797 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 LAMC2Q13753 1193 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 PARD3BQ8TEW8 1205 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 TUBB4AP04350 444 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 DLATP10515 647 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 LAMTOR4Q0VGL1 99 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 SPA17Q15506 151 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 CCL14Q16627 93 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF571Q7Z3V5 609 aaPredicted RBP16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ARHGEF19Q8IW93 802 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 ADAMTS1Q9UHI8 967 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 DNAJC12Q9UKB3 198 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
COL25A1-201ENST00000399126 A0A087X0T9 212 aa16.41■□□□□ 0.22
COL25A1-201ENST00000399126 IGKV6-21A0A0C4DH24 114 aa16.41■□□□□ 0.22
COL25A1-201ENST00000399126 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
COL25A1-201ENST00000399126 ADCY3O60266 1144 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms