RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ST8SIA4Q92187 359 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 RBM17Q96I25 401 aaKnown RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 VRK1Q99986 396 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 KRT23Q9C075 422 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 DPH5Q9H2P9 285 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SAYSD1Q9NPB0 183 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SEPT11Q9NVA2 429 aaKnown RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 MINPP1Q9UNW1 487 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ZNF711Q9Y462 761 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 LRRC14BA6NHZ5 514 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 BEST1O76090 585 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 THBDP07204 575 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 GSTM1P09488 218 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 CKMT1AP12532 417 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PLS3P13797 630 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PTX3P26022 381 aaPredicted RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 PBX2P40425 430 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 GFRA1P56159 465 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PFKPQ01813 784 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 MAP4K2Q12851 820 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 IL10RAQ13651 578 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 SPIDRQ14159 915 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 ATAT1Q5SQI0 421 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 BEND5Q7L4P6 421 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 IL22RA1Q8N6P7 574 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 AUTS2Q8WXX7 1259 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 GRAMD1AQ96CP6 724 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 C18orf8Q96DM3 657 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 TMEM41AQ96HV5 264 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 ZNF830Q96NB3 372 aaPredicted RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 CCDC86Q9H6F5 360 aaKnown RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 PAPOLBQ9NRJ5 636 aaKnown RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 NSMCE4AQ9NXX6 385 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 GTF3C4Q9UKN8 822 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 MEIS3P2A8K0S8 358 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 SP100P23497 879 aaPredicted RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 LTBRP36941 435 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PEX19P40855 299 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PHKA1P46020 1223 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 ROR1Q01973 937 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 PPARAQ07869 468 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 GALNT2Q10471 571 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 SCARF1Q14162 830 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 KIZQ2M2Z5 673 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 TTC39CQ8N584 583 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 C10orf53Q8N6V4 93 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 ZNF507Q8TCN5 953 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 KRT35Q92764 455 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 ZNF653Q96CK0 615 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 KLHL4Q9C0H6 718 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 INCENPQ9NQS7 918 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 DNAJB12Q9NXW2 375 aaKnown RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 CACNA2D2Q9NY47 1150 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 DENND2AQ9ULE3 1009 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 HIF3AQ9Y2N7 669 aa3.9□□□□□ -1.78
XRN1-202ENST00000392981 MTF2Q9Y483 593 aaPredicted RBP3.9□□□□□ -1.78
XRN1-202ENST00000392981 BAZ1AQ9NRL2 1556 aaPredicted RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 PI4KAP2A4QPH2 592 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 IPO5O00410 1097 aaKnown RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 EEF1GP26641 437 aaKnown RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 NNMTP40261 264 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CAPZA2P47755 286 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 GPR85P60893 370 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 KRT17Q04695 432 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 LRP8Q14114 963 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 PPP2R5BQ15173 497 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 NR0B2Q15466 257 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 TTC39AQ5SRH9 613 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 KRT28Q7Z3Y7 464 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 SAPCD2Q86UD0 394 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ANKRD44Q8N8A2 993 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CCHCR1Q8TD31 782 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CENPIQ92674 756 aaPredicted RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 TDP1Q9NUW8 608 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 TMOD4Q9NZQ9 345 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ARHGAP10A1A4S6 786 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CDC14CA4D256 554 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 H0Y8X5 98 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 RGS13O14921 159 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ASNA1O43681 348 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 C6orf222P0C671 652 aaPredicted RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 GRK3P35626 688 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 MPEG1Q2M385 716 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ZNF674Q2M3X9 581 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 HP1BP3Q5SSJ5 553 aaPredicted RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 THEMIS2Q5TEJ8 643 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 C16orf87Q6PH81 154 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CRTC3Q6UUV7 619 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CEP128Q6ZU80 1094 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ESPNLQ6ZVH7 1005 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 IKBIPQ70UQ0 350 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 NBPF5PQ86XG9 351 aaPredicted RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 TTLL2Q9BWV7 592 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 CD244Q9BZW8 370 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 ELAC1Q9H777 363 aaKnown RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 XAB2Q9HCS7 855 aaKnown RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 MRPL15Q9P015 296 aaKnown RBP3.9□□□□□ -1.79
XRN1-202ENST00000392981 ZNF212Q9UDV6 495 aa3.9□□□□□ -1.79
XRN1-202ENST00000392981 SERPINB13Q9UIV8 391 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms