RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CEP89Q96ST8 783 aa11.03□□□□□ -0.64
LTN1-203ENST00000389195 SENP7Q9BQF6 1050 aa11.03□□□□□ -0.64
LTN1-203ENST00000389195 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
LTN1-203ENST00000389195 TMEM206Q9H813 350 aa11.03□□□□□ -0.64
LTN1-203ENST00000389195 MYPNQ86TC9 1320 aa11.03□□□□□ -0.64
LTN1-203ENST00000389195 DNAJC25-GNG10A0A024R161 153 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 SGPL1O95470 568 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 HUNKP57058 714 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 SLC18A3Q16572 532 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.64
LTN1-203ENST00000389195 METTL7BQ6UX53 244 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 DPP9Q86TI2 863 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 TMEM192Q8IY95 271 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 PARD3BQ8TEW8 1205 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 IFT74Q96LB3 600 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 AZI2Q9H6S1 392 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 AIPL1Q9NZN9 384 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 NAGPAQ9UK23 515 aa11.02□□□□□ -0.64
LTN1-203ENST00000389195 NFASCO94856 1347 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 ATG7O95352 703 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 TNNI1P19237 187 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 JAM2P57087 298 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 SLC7A5Q01650 507 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 CELF3Q5SZQ8 465 aaKnown RBP11.02□□□□□ -0.65
LTN1-203ENST00000389195 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
LTN1-203ENST00000389195 DEPTORQ8TB45 409 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 HDAC7Q8WUI4 952 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 KREMEN1Q96MU8 473 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.65
LTN1-203ENST00000389195 ZHX1Q9UKY1 873 aaPredicted RBP11.02□□□□□ -0.65
LTN1-203ENST00000389195 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
LTN1-203ENST00000389195 VTNP04004 478 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 ICAM3P32942 547 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 MXI1P50539 228 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 CCL14Q16627 93 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 SLC30A5Q8TAD4 765 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 OLIG1Q8TAK6 271 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 NPLOC4Q8TAT6 608 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 KIFAP3Q92845 792 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 CFHP08603 1231 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 CDK17Q00537 523 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 DAB2IPQ5VWQ8 1189 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
LTN1-203ENST00000389195 ADAT2Q7Z6V5 191 aaKnown RBP11.01□□□□□ -0.65
LTN1-203ENST00000389195 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 EHBP1Q8NDI1 1231 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 OR5B17Q8NGF7 314 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 ARHGEF26Q96DR7 871 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 BTBD6Q96KE9 485 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 ARHGAP28Q9P2N2 729 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
LTN1-203ENST00000389195 IGF2BP3O00425 579 aaKnown RBP eCLIP11□□□□□ -0.65
LTN1-203ENST00000389195 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
LTN1-203ENST00000389195 CYP2C19P33261 490 aa11□□□□□ -0.65
LTN1-203ENST00000389195 SOX5P35711 763 aa11□□□□□ -0.65
LTN1-203ENST00000389195 STAT1P42224 750 aa11□□□□□ -0.65
LTN1-203ENST00000389195 NEDD9Q14511 834 aa11□□□□□ -0.65
LTN1-203ENST00000389195 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
LTN1-203ENST00000389195 TRAPPC11Q7Z392 1133 aa11□□□□□ -0.65
LTN1-203ENST00000389195 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
LTN1-203ENST00000389195 CAGE1Q8TC20 777 aa11□□□□□ -0.65
LTN1-203ENST00000389195 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
LTN1-203ENST00000389195 ANKZF1Q9H8Y5 726 aa11□□□□□ -0.65
LTN1-203ENST00000389195 PNMA2Q9UL42 364 aa11□□□□□ -0.65
LTN1-203ENST00000389195 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
LTN1-203ENST00000389195 INO80B-WBP1J3KQ70 363 aa11□□□□□ -0.65
LTN1-203ENST00000389195 SLC25A27O95847 323 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MYCNP04198 464 aaPredicted RBP11□□□□□ -0.65
LTN1-203ENST00000389195 LAMTOR4Q0VGL1 99 aa11□□□□□ -0.65
LTN1-203ENST00000389195 BIRC3Q13489 604 aa11□□□□□ -0.65
LTN1-203ENST00000389195 ZNF394Q53GI3 561 aa11□□□□□ -0.65
LTN1-203ENST00000389195 EFCAB12Q6NXP0 572 aa11□□□□□ -0.65
LTN1-203ENST00000389195 TAPT1Q6NXT6 567 aa11□□□□□ -0.65
LTN1-203ENST00000389195 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MAMDC4Q6UXC1 1216 aa11□□□□□ -0.65
LTN1-203ENST00000389195 RSRC2Q7L4I2 434 aaKnown RBP11□□□□□ -0.65
LTN1-203ENST00000389195 GPR142Q7Z601 462 aa11□□□□□ -0.65
LTN1-203ENST00000389195 SRGAP1Q7Z6B7 1085 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MCPH1Q8NEM0 835 aa11□□□□□ -0.65
LTN1-203ENST00000389195 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
LTN1-203ENST00000389195 TLR10Q9BXR5 811 aa11□□□□□ -0.65
LTN1-203ENST00000389195 INO80BQ9C086 356 aaPredicted RBP11□□□□□ -0.65
LTN1-203ENST00000389195 THAP2Q9H0W7 228 aa11□□□□□ -0.65
LTN1-203ENST00000389195 TMEM110-MUSTN1A8MSY1 372 aa11□□□□□ -0.65
LTN1-203ENST00000389195 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
LTN1-203ENST00000389195 MMEP08473 750 aa11□□□□□ -0.65
LTN1-203ENST00000389195 KRT5P13647 590 aa11□□□□□ -0.65
LTN1-203ENST00000389195 INSRRP14616 1297 aa11□□□□□ -0.65
LTN1-203ENST00000389195 ARL2P36404 184 aa11□□□□□ -0.65
LTN1-203ENST00000389195 ZNF157P51786 506 aaPredicted RBP11□□□□□ -0.65
LTN1-203ENST00000389195 GALCP54803 685 aa11□□□□□ -0.65
LTN1-203ENST00000389195 CYP24A1Q07973 514 aa11□□□□□ -0.65
LTN1-203ENST00000389195 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms