RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
TOP3A-201ENST00000321105 KCNJ6P48051 423 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 BPIFB4P59827 614 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 ZBTB45Q96K62 511 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-201ENST00000321105 KCNG1Q9UIX4 513 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 M0QZ92 97 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 CYP2C8P10632 490 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-201ENST00000321105 DLG4P78352 724 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 CCDC38Q502W7 563 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 ZNF667Q5HYK9 610 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 WDR59Q6PJI9 974 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 NEK9Q8TD19 979 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 STK33Q9BYT3 514 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 MIS12Q9H081 205 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 MAD1L1Q9Y6D9 718 aa11.8□□□□□ -0.52
TOP3A-201ENST00000321105 SCP2P22307 547 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 ATP11AP98196 1134 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 NME8Q8N427 588 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 TXNDC16Q9P2K2 825 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 INPP5FQ9Y2H2 1132 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 MAP3K6O95382 1288 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SGPL1O95470 568 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 CYP2B6P20813 491 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SLC12A3P55017 1021 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 RWDD2BP57060 319 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 BASP1P80723 227 aaKnown RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 CBWD6Q4V339 395 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 ARSHQ5FYA8 562 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 CBWD3Q5JTY5 395 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 CBWD5Q5RIA9 395 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 RFX6Q8HWS3 928 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SPATA20Q8TB22 786 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SEPT1Q8WYJ6 367 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 MED4Q9NPJ6 270 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SAMD15Q9P1V8 674 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SSU72P8A0A1W2PR75 194 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 ZRANB2O95218 330 aaKnown RBP eCLIP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 ECEL1O95672 775 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 SPATA31C1P0DKV0 1188 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 NUMBP49757 651 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 PGM5Q15124 567 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 TMEM119Q4V9L6 283 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 RNF10Q8N5U6 811 aaKnown RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 RFFLQ8WZ73 363 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 P2RX7Q99572 595 aaKnown RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 A1CFQ9NQ94 594 aaKnown RBP11.79□□□□□ -0.52
TOP3A-201ENST00000321105 TBX20Q9UMR3 447 aa11.79□□□□□ -0.52
TOP3A-201ENST00000321105 CTSHP09668 335 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 P4HA1P13674 534 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 GLRA4Q5JXX5 417 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 MKL1Q969V6 931 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 SLC35C1Q96A29 364 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 PBKQ96KB5 322 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 PASKQ96RG2 1323 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 MYL3P08590 195 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 SAT1P21673 171 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 POLR2BP30876 1174 aaKnown RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 RGS7P49802 495 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 HNRNPH2P55795 449 aaKnown RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 FERMT1Q9BQL6 677 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 ALG6Q9Y672 507 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 BAZ2AQ9UIF9 1905 aaKnown RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 PRKCBP05771 671 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 ARL1P40616 181 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 AMHR2Q16671 573 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 RHOT2Q8IXI1 618 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 TATDN2Q93075 761 aa11.78□□□□□ -0.52
TOP3A-201ENST00000321105 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
TOP3A-201ENST00000321105 WDR91A4D1P6 747 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 RAD51CO43502 376 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 PSMA2P25787 234 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 ARPP19P56211 112 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 ALCAMQ13740 583 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 NCOA4Q13772 614 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.52
TOP3A-201ENST00000321105 Q4G0T1 1027 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.52
TOP3A-201ENST00000321105 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 CCDC91Q7Z6B0 441 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms