RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HIC1Q14526 733 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF618Q5T7W0 954 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 CDCA2Q69YH5 1023 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 RBM43Q6ZSC3 357 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 GUF1Q8N442 669 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM161BQ8NDZ6 487 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 SPATA20Q8TB22 786 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 HPS3Q969F9 1004 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 DHTKD1Q96HY7 919 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 LBHD1Q9BQE6 289 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 GBP3Q9H0R5 595 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 ST6GALNAC4Q9H4F1 302 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 CGNQ9P2M7 1197 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 ARHGAP28Q9P2N2 729 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 ANKFY1Q9P2R3 1169 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 TBX20Q9UMR3 447 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 MAPK8IP1Q9UQF2 711 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 PIN4Q9Y237 131 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 GPR32O75388 356 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 HARSP12081 509 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 RPL13P26373 211 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 AXLP30530 894 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 BMP8BP34820 402 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SNRPFP62306 86 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 GTF2BQ00403 316 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 FAAP100Q0VG06 881 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 STK4Q13043 487 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 ZC2HC1CQ53FD0 456 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 CT47A1Q5JQC4 288 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 ARMCX5Q6P1M9 558 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 NOTUMQ6P988 496 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 MAP4K3Q8IVH8 894 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 DEFB123Q8N688 67 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 ANKRD20A12PQ8NF67 263 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 NELFBQ8WX92 580 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SEPT8Q92599 483 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 NTPCRQ9BSD7 190 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 NOC4LQ9BVI4 516 aaKnown RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 ADAMTS10Q9H324 1103 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-218ENST00000641491 STXBP5LQ9Y2K9 1186 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 KAT6AQ92794 2004 aa14.2□□□□□ -0.14
PHGDH-218ENST00000641491 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 ACKR2O00590 384 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 TPM2P07951 284 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 CCL23P55773 120 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 MBTD1Q05BQ5 628 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 LRRC63Q05C16 580 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 ZNF568Q3ZCX4 644 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 ANO6Q4KMQ2 910 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 ATF7IP2Q5U623 682 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 TWF2Q6IBS0 349 aaKnown RBP14.19□□□□□ -0.14
PHGDH-218ENST00000641491 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 RPUSD2Q8IZ73 545 aaKnown RBP14.19□□□□□ -0.14
PHGDH-218ENST00000641491 KIAA0895Q8NCT3 520 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 APBB2Q92870 758 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 TYW1Q9NV66 732 aaKnown RBP14.19□□□□□ -0.14
PHGDH-218ENST00000641491 FRMD4BQ9Y2L6 1034 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 ARID2Q68CP9 1835 aa14.19□□□□□ -0.14
PHGDH-218ENST00000641491 KIAA0391O15091 583 aaKnown RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 CLDN3O15551 220 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 ACTN1P12814 892 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 IBSPP21815 317 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 PRCPP42785 496 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 RBL2Q08999 1139 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 KYAT1Q16773 422 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 DPCR1Q3MIW9 517 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 COBLL1Q53SF7 1204 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 FAM26DQ5JW98 314 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 ZPBP2Q6X784 338 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 FAM43BQ6ZT52 329 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 USP37Q86T82 979 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 FAM114A1Q8IWE2 563 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 SCFD1Q8WVM8 642 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 DHX38Q92620 1227 aaKnown RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 P2RX5Q93086 422 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 GDF15Q99988 308 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 COL25A1Q9BXS0 654 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
PHGDH-218ENST00000641491 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 IFT122Q9HBG6 1241 aa14.18□□□□□ -0.14
PHGDH-218ENST00000641491 CNTNAP2Q9UHC6 1331 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 PDXKO00764 312 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CETN3O15182 167 aa14.17□□□□□ -0.14
PHGDH-218ENST00000641491 CSDE1O75534 798 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms