RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ZNF365Q70YC5 407 aa21.37■■□□□ 1.01
HLA-A-209ENST00000638375 SLC17A8Q8NDX2 589 aa21.37■■□□□ 1.01
HLA-A-209ENST00000638375 LINC01599Q8WXQ3 324 aa21.37■■□□□ 1.01
HLA-A-209ENST00000638375 APBB2Q92870 758 aa21.37■■□□□ 1.01
HLA-A-209ENST00000638375 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.37■■□□□ 1.01
HLA-A-209ENST00000638375 AGPAT5Q9NUQ2 364 aa21.37■■□□□ 1.01
HLA-A-209ENST00000638375 H0YCG3 227 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 ACKR2O00590 384 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 MGEA5O60502 916 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 ERLIN2O94905 339 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 RHOBTB3O94955 611 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 SARSP49591 514 aaKnown RBP21.36■■□□□ 1.01
HLA-A-209ENST00000638375 DSC3Q14574 896 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 KCNB1Q14721 858 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 PRIMPOLQ96LW4 560 aa21.36■■□□□ 1.01
HLA-A-209ENST00000638375 CNTNAP2Q9UHC6 1331 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 SMC2O95347 1197 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 GCNT3O95395 438 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 ARF4P18085 180 aaPredicted RBP21.35■■□□□ 1.01
HLA-A-209ENST00000638375 STK4Q13043 487 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 NT5DC1Q5TFE4 455 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 PSRC1Q6PGN9 363 aaPredicted RBP21.35■■□□□ 1.01
HLA-A-209ENST00000638375 RTN4RL1Q86UN2 441 aaPredicted RBP21.35■■□□□ 1.01
HLA-A-209ENST00000638375 KIAA0895Q8NCT3 520 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 SMARCE1Q969G3 411 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 CPB2Q96IY4 423 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 NUP62CLQ9H1M0 184 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 SLC39A2Q9NP94 309 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 TBX20Q9UMR3 447 aa21.35■■□□□ 1.01
HLA-A-209ENST00000638375 PIN4Q9Y237 131 aaKnown RBP21.35■■□□□ 1.01
HLA-A-209ENST00000638375 FGBP02675 491 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 SCP2P22307 547 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 KCNA1Q09470 495 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 PRPF4BQ13523 1007 aaKnown RBP21.34■■□□□ 1.01
HLA-A-209ENST00000638375 EPM2AIP1Q7L775 607 aaPredicted RBP21.34■■□□□ 1.01
HLA-A-209ENST00000638375 OTOP2Q7RTS6 562 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 MAP4K3Q8IVH8 894 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 CCDC47Q96A33 483 aaKnown RBP21.34■■□□□ 1.01
HLA-A-209ENST00000638375 GSDMAQ96QA5 445 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 FTHL17Q9BXU8 183 aa21.34■■□□□ 1.01
HLA-A-209ENST00000638375 PDE4DIPQ5VU43 2346 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 PRPF6O94906 941 aaKnown RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 PTMSP20962 102 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 STRN3Q13033 797 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 PSMD2Q13200 908 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 ALCAMQ13740 583 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 IKBKEQ14164 716 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 C9orf50Q5SZB4 431 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 L1TD1Q5T7N2 865 aaKnown RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 CDR2LQ86X02 465 aaPredicted RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 HVCN1Q96D96 273 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 ADAM2Q99965 735 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 TARS2Q9BW92 718 aaKnown RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 MRPL4Q9BYD3 311 aaKnown RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
HLA-A-209ENST00000638375 CHST12Q9NRB3 414 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 MAN1B1Q9UKM7 699 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 PCDHB13Q9Y5F0 798 aa21.33■■□□□ 1.01
HLA-A-209ENST00000638375 ABHD14A-ACY1A0A1B0GW23 586 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 ENPP3O14638 875 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 ACTN1P12814 892 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 AXLP30530 894 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 ABCD1P33897 745 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 HOXD13P35453 343 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 NFKBIBQ15653 356 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 EEF1DP3Q658K8 133 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 SCFD1Q8WVM8 642 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 HERVK_113Q902F9 699 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 ACO2Q99798 780 aaKnown RBP21.32■■□□□ 1
HLA-A-209ENST00000638375 UBE2OQ9C0C9 1292 aaKnown RBP21.32■■□□□ 1
HLA-A-209ENST00000638375 IKZF4Q9H2S9 585 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 PDZD7Q9H5P4 517 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 RGS18Q9NS28 235 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 RMND1Q9NWS8 449 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 KIAA1468Q9P260 1216 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 GDAQ9Y2T3 454 aa21.32■■□□□ 1
HLA-A-209ENST00000638375 A0A1B0GUA9 196 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 EIF3DO15371 548 aaKnown RBP eCLIP21.31■■□□□ 1
HLA-A-209ENST00000638375 BAIAP3O94812 1187 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 PIGRP01833 764 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 ZSCAN20P17040 1043 aaPredicted RBP21.31■■□□□ 1
HLA-A-209ENST00000638375 UBXN11Q5T124 520 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 NOTUMQ6P988 496 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.31■■□□□ 17e-8■■■■□ 21.7
HLA-A-209ENST00000638375 FAM43BQ6ZT52 329 aaPredicted RBP21.31■■□□□ 1
HLA-A-209ENST00000638375 ZNF507Q8TCN5 953 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 CXXC1Q9P0U4 656 aaPredicted RBP21.31■■□□□ 1
HLA-A-209ENST00000638375 TMEM63CQ9P1W3 806 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 TNFSF13BQ9Y275 285 aa21.31■■□□□ 1
HLA-A-209ENST00000638375 CEP290O15078 2479 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 C9IYK1 514 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 ABLIM1O14639 778 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 WDR5P61964 334 aaKnown RBP21.3■■□□□ 1
HLA-A-209ENST00000638375 NCBP1Q09161 790 aaKnown RBP21.3■■□□□ 1
HLA-A-209ENST00000638375 SHHQ15465 462 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 BMT2Q1RMZ1 405 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 TMEM132AQ24JP5 1023 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 KLHL40Q2TBA0 621 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 ATF7IP2Q5U623 682 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms