RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SLC20A1Q8WUM9 679 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 CARD9Q9H257 536 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 DPH5Q9H2P9 285 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 TMBIM4Q9HC24 238 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 NDUFAB1O14561 156 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 USP8P40818 1118 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 MAGEA9P43362 315 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 GUCY1A3Q02108 690 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 RASA3Q14644 834 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 DCAF12L1Q5VU92 463 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 ADAT2Q7Z6V5 191 aaKnown RBP18.62■□□□□ 0.57
NEK3-206ENST00000611833 ARHGEF19Q8IW93 802 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 RHOT2Q8IXI1 618 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 VTI1AQ96AJ9 217 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 TAAR1Q96RJ0 339 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 SLC38A10Q9HBR0 1119 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 FAM114A2Q9NRY5 505 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 CTTNBP2NLQ9P2B4 639 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 GOLGA6L10A0A0M3HER8 536 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 EIF2AK2P19525 551 aaKnown RBP18.62■□□□□ 0.57
NEK3-206ENST00000611833 MTMR3Q13615 1198 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 UAP1Q16222 522 aaPredicted RBP18.62■□□□□ 0.57
NEK3-206ENST00000611833 UGCGQ16739 394 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 HAUS6Q7Z4H7 955 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 ZSWIM2Q8NEG5 633 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 OR2W6PQ8NHA6 318 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 LPAR1Q92633 364 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 MYOZ2Q9NPC6 264 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 COG5Q9UP83 839 aa18.62■□□□□ 0.57
NEK3-206ENST00000611833 P4HA2O15460 535 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 FTLP02792 175 aaPredicted RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 YWHABP31946 246 aaKnown RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 FLT3P36888 993 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 ZNF211Q13398 564 aaPredicted RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 TRIM31Q9BZY9 425 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 NR2E1Q9Y466 385 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 LYPLA2O95372 231 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 HPDP32754 393 aaPredicted RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 LSP1P33241 339 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 RPS6P62753 249 aaKnown RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 PGM5Q15124 567 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 PPP2R5EQ16537 467 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 C1orf220Q5T0J3 134 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 EMC10Q5UCC4 262 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 C12orf56Q8IXR9 622 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 TMEM174Q8WUU8 243 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 TRIM51Q9BSJ1 452 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 KIAA1683Q9H0B3 1180 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 RAB17Q9H0T7 212 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 GPRC5CQ9NQ84 441 aa18.61■□□□□ 0.57
NEK3-206ENST00000611833 ASTN2O75129 1339 aaPredicted RBP18.61■□□□□ 0.57
NEK3-206ENST00000611833 H0YGN5 161 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 ATP9AO75110 1047 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 PTENP60484 403 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 DR1Q01658 176 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 EPC2Q52LR7 807 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 RUFY4Q6ZNE9 571 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 PLEKHO2Q8TD55 490 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 TBC1D22BQ9NU19 505 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 ALG6Q9Y672 507 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 NFS1Q9Y697 457 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 BACH1O14867 736 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 SLC16A4O15374 487 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 EGFRP00533 1210 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 PEX3P56589 373 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 GTF2BQ00403 316 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 POU5F1Q01860 360 aaKnown RBP18.6■□□□□ 0.57
NEK3-206ENST00000611833 SLC20A2Q08357 652 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 ZNF844Q08AG5 666 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 CLUL1Q15846 466 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 TBC1D10BQ4KMP7 808 aaPredicted RBP18.6■□□□□ 0.57
NEK3-206ENST00000611833 EFCAB13Q8IY85 973 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 ARFGAP2Q8N6H7 521 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 SEC14L1Q92503 715 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.6■□□□□ 0.57
NEK3-206ENST00000611833 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 BCCIPQ9P287 314 aaKnown RBP eCLIP18.6■□□□□ 0.57
NEK3-206ENST00000611833 FAM169AQ9Y6X4 670 aa18.6■□□□□ 0.57
NEK3-206ENST00000611833 TMEM110-MUSTN1A8MSY1 372 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 MDH1P40925 334 aaKnown RBP18.59■□□□□ 0.57
NEK3-206ENST00000611833 MXI1P50539 228 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 GPC5P78333 572 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
NEK3-206ENST00000611833 ZNF746Q6NUN9 644 aaPredicted RBP18.59■□□□□ 0.57
NEK3-206ENST00000611833 TMC3Q7Z5M5 1100 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 UBL4BQ8N7F7 174 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 PFASO15067 1338 aa18.59■□□□□ 0.57
NEK3-206ENST00000611833 GOLGA8IPA6NC78 632 aa18.58■□□□□ 0.57
NEK3-206ENST00000611833 GOLGA8JA6NMD2 632 aa18.58■□□□□ 0.57
NEK3-206ENST00000611833 MYCLP12524 364 aaPredicted RBP18.58■□□□□ 0.57
NEK3-206ENST00000611833 COPB2P35606 906 aa18.58■□□□□ 0.57
NEK3-206ENST00000611833 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.57
NEK3-206ENST00000611833 C4orf19Q8IY42 314 aa18.58■□□□□ 0.57
NEK3-206ENST00000611833 PPM1EQ8WY54 764 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms