RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 MAN1C1Q9NR34 630 aa12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 DDX25Q9UHL0 483 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 COL4A3BPQ9Y5P4 624 aa12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 IRAK3Q9Y616 596 aa12.56□□□□□ -0.4
PRKCSH-220ENST00000593104 DOCK6Q96HP0 2047 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 ARID2Q68CP9 1835 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 PROB1E7EW31 1015 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 LILRB3O75022 631 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 MLH1P40692 756 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 NBL1P41271 181 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 DNM2P50570 870 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 POLGP54098 1239 aaPredicted RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 AK2P54819 239 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 PSMC5P62195 406 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 BMS1Q14692 1282 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 SIX5Q8N196 739 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 PRPF31Q8WWY3 499 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 CEP170P1Q96L14 293 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 MBOAT7Q96N66 472 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 KCNK12Q9HB15 430 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 RGL1Q9NZL6 768 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
PRKCSH-220ENST00000593104 CYP3A7-CYP3A51PA0A087WV96 503 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 A0A087WWV3 80 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 TEX28O15482 410 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 ZNF623O75123 536 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 CYP3A7P24462 503 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 OR1G1P47890 313 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 CYP4A11Q02928 519 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 LAMTOR4Q0VGL1 99 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 TDGQ13569 410 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 CENPQQ7L2Z9 268 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 RNF149Q8NC42 400 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 RDM1Q8NG50 284 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 URGCPQ8TCY9 931 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 OXER1Q8TDS5 423 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 MYADMQ96S97 322 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 GAD1Q99259 594 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 SH3GLB2Q9NR46 395 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 FBXL21Q9UKT6 434 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 USTQ9Y2C2 406 aa12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-220ENST00000593104 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 CCDC195A0A1B0GUA6 201 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 INPPL1O15357 1258 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 SKIP12755 728 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 AOC1P19801 751 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 QARSP47897 775 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 RAB27AP51159 221 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 SCNN1GP51170 649 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 EVCP57679 992 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 GIT2Q14161 759 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 EMC2Q15006 297 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 NCAPH2Q6IBW4 605 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 MRPL10Q7Z7H8 261 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 PALB2Q86YC2 1186 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 HAS1Q92839 578 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 PGBD4Q96DM1 585 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 DYDC2Q96IM9 177 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 LXNQ9BS40 222 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 EMILIN2Q9BXX0 1053 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 IRF2BPLQ9H1B7 796 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 MRPL17Q9NRX2 175 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 DUSP12Q9UNI6 340 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 IPPQ9Y573 584 aa12.53□□□□□ -0.4
PRKCSH-220ENST00000593104 STK25O00506 426 aa12.52□□□□□ -0.41
PRKCSH-220ENST00000593104 B4GALT5O43286 388 aa12.52□□□□□ -0.41
PRKCSH-220ENST00000593104 TSPAN1O60635 241 aa12.52□□□□□ -0.41
PRKCSH-220ENST00000593104 DEXIO95424 95 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms