RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PEX10O60683 326 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 OAS2P29728 719 aaKnown RBP21.37■■□□□ 1.01
CLIP3-206ENST00000593074 ADSSP30520 456 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 ACTR2P61160 394 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 CNTN2Q02246 1040 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 ABHD15Q6UXT9 468 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 MOB2Q70IA6 237 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 CCDC60Q8IWA6 550 aaPredicted RBP21.37■■□□□ 1.01
CLIP3-206ENST00000593074 BSNDQ8WZ55 320 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 VTI1AQ96AJ9 217 aa21.37■■□□□ 1.01
CLIP3-206ENST00000593074 ADRB2P07550 413 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 RTP1P59025 263 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 FAM193AP78312 1265 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 PRKCEQ02156 737 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 DNAAF5Q86Y56 855 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 MCPH1Q8NEM0 835 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 U2AF1L4Q8WU68 220 aaKnown RBP21.36■■□□□ 1.01
CLIP3-206ENST00000593074 KIFC3Q9BVG8 833 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 SPATC1LQ9H0A9 340 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 KMT5AQ9NQR1 393 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 TELO2Q9Y4R8 837 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 IGSF9BQ9UPX0 1349 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 DENND3A2RUS2 1198 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 ANKRD63C9JTQ0 380 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 DGAT1O75907 488 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 ICAM3P32942 547 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 GCLMP48507 274 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 NCAPG2Q86XI2 1143 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 GLYCTKQ8IVS8 523 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 TPCN2Q8NHX9 752 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 MS4A14Q96JA4 679 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 LRRC1Q9BTT6 524 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 NCANO14594 1321 aa21.36■■□□□ 1.01
CLIP3-206ENST00000593074 SP4Q02446 784 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 SNRNP35Q16560 246 aaKnown RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 MIS18BP1Q6P0N0 1132 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 CCNI2Q6ZMN8 369 aaPredicted RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 RBM12Q9NTZ6 932 aaKnown RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 PACSIN2Q9UNF0 486 aaPredicted RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 CNGA1P29973 690 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 MXI1P50539 228 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 ALDH5A1P51649 535 aaPredicted RBP21.35■■□□□ 1.01
CLIP3-206ENST00000593074 SLFN11Q7Z7L1 901 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 ARHGEF19Q8IW93 802 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 TMEM117Q9H0C3 514 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 VIPAS39Q9H9C1 493 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 XPNPEP1Q9NQW7 623 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 CYP26B1Q9NR63 512 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 KCNH4Q9UQ05 1017 aa21.35■■□□□ 1.01
CLIP3-206ENST00000593074 LRRIQ3A6PVS8 624 aaPredicted RBP21.34■■□□□ 1.01
CLIP3-206ENST00000593074 H3BQF6 201 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 FOXN3O00409 490 aaPredicted RBP21.34■■□□□ 1.01
CLIP3-206ENST00000593074 SUPT20HL2P0C7V6 817 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 NOP2P46087 812 aaKnown RBP21.34■■□□□ 1.01
CLIP3-206ENST00000593074 GALCP54803 685 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 GPS2Q13227 327 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 PPIL2Q13356 520 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 ARHGAP44Q17R89 818 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 CBWD2Q8IUF1 395 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 FBXL18Q96ME1 805 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 SEPT9Q9UHD8 586 aaPredicted RBP21.34■■□□□ 1.01
CLIP3-206ENST00000593074 AGTPBP1Q9UPW5 1226 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 ADGRA3Q8IWK6 1321 aa21.34■■□□□ 1.01
CLIP3-206ENST00000593074 ZMYND10O75800 440 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 KIF4AO95239 1232 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 TMEM253P0C7T8 217 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 MYBL2P10244 700 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 SOX10P56693 466 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 SP2Q02086 613 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 RPS6KA1Q15418 735 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 GLE1Q53GS7 698 aaKnown RBP21.33■■□□□ 1.01
CLIP3-206ENST00000593074 SLC39A4Q6P5W5 647 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 HDAC7Q8WUI4 952 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 ATP6V0A4Q9HBG4 840 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 PDE11AQ9HCR9 933 aa21.33■■□□□ 1.01
CLIP3-206ENST00000593074 UBE2TQ9NPD8 197 aaPredicted RBP21.33■■□□□ 1.01
CLIP3-206ENST00000593074 GOLGA8IPA6NC78 632 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 GOLGA8JA6NMD2 632 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 SORBS3O60504 671 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 LRRN2O75325 713 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 FSTL1Q12841 308 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 XKR3Q5GH77 459 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 SEPT14Q6ZU15 432 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 ARMC9Q7Z3E5 817 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 LMBR1Q8WVP7 490 aa21.33■■□□□ 1
CLIP3-206ENST00000593074 DMGDHQ9UI17 866 aaKnown RBP21.33■■□□□ 1
CLIP3-206ENST00000593074 ATG7O95352 703 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 ZBTB48P10074 688 aaPredicted RBP21.32■■□□□ 1
CLIP3-206ENST00000593074 CYFIP1Q7L576 1253 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 PARD3BQ8TEW8 1205 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 RFFLQ8WZ73 363 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 TAF4BQ92750 862 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 STIM2Q9P246 746 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 ARHGAP28Q9P2N2 729 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 TNFRSF8P28908 595 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 MATR3P43243 847 aaKnown RBP eCLIP21.32■■□□□ 1
CLIP3-206ENST00000593074 DNA2P51530 1060 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 C8orf74Q6P047 294 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms