RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FAM178BQ8IXR5 827 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
APOC1-208ENST00000592535 MCPH1Q8NEM0 835 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 RSPH1Q8WYR4 309 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 TCF25Q9BQ70 676 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
APOC1-208ENST00000592535 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 NRDE2Q9H7Z3 1164 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 TLE6Q9H808 572 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 RSAD1Q9HA92 442 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 CD320Q9NPF0 282 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 SMC3Q9UQE7 1217 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 LRRIQ4A6NIV6 560 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 PP2D1A8MPX8 630 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 H3BQV1 296 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 B4GALT5O43286 388 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 B4GALT3O60512 393 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 GLP2RO95838 553 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 MUTP22033 750 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 AXLP30530 894 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 ALDH7A1P49419 539 aaKnown RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 AFF1P51825 1210 aaKnown RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 KRT17Q04695 432 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 PDIA5Q14554 519 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 PDE12Q6L8Q7 609 aaKnown RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 NOTUMQ6P988 496 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
APOC1-208ENST00000592535 IGSF22Q8N9C0 903 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 GBP3Q9H0R5 595 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 ENTPD7Q9NQZ7 604 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 CLEC1BQ9P126 229 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 CD207Q9UJ71 328 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 IPPQ9Y573 584 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
APOC1-208ENST00000592535 HIDE1A8MVS5 230 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 LAD1O00515 517 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 MBTPS2O43462 519 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 CYP11B2P19099 503 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 PRPHP41219 470 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 RNASELQ05823 741 aaKnown RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 NCBP1Q09161 790 aaKnown RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 DUSP6Q16828 381 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 RILPL1Q5EBL4 403 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 CDR2LQ86X02 465 aaPredicted RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 VN1R2Q8NFZ6 395 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 CCDC51Q96ER9 411 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 MSLNLQ96KJ4 702 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 RAB34Q9BZG1 259 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 CSRNP2Q9H175 543 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 BHMT2Q9H2M3 363 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 DDX19AQ9NUU7 478 aaKnown RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 DNAJB4Q9UDY4 337 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 BARX2Q9UMQ3 279 aaPredicted RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 KIAA1024Q9UPX6 916 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 FAM50BQ9Y247 325 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 HES2Q9Y543 173 aa15.38■□□□□ 0.05
APOC1-208ENST00000592535 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.38■□□□□ 0.05
APOC1-208ENST00000592535 DDHD2O94830 711 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 GALTP07902 379 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 ITGA4P13612 1032 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 CDC25AP30304 524 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 SLC11A1P49279 550 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 ATP2C1P98194 919 aaPredicted RBP15.37■□□□□ 0.05
APOC1-208ENST00000592535 SMAD4Q13485 552 aaKnown RBP15.37■□□□□ 0.05
APOC1-208ENST00000592535 CDCA2Q69YH5 1023 aaPredicted RBP15.37■□□□□ 0.05
APOC1-208ENST00000592535 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 TMC7Q7Z402 723 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 GJD3Q8N144 294 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 KHSRPQ92945 711 aaKnown RBP eCLIP15.37■□□□□ 0.05
APOC1-208ENST00000592535 TMEM169Q96HH4 297 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 CDCA3Q99618 268 aaPredicted RBP15.37■□□□□ 0.05
APOC1-208ENST00000592535 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 POLD4Q9HCU8 107 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 NGRNQ9NPE2 291 aaKnown RBP15.37■□□□□ 0.05
APOC1-208ENST00000592535 STK24Q9Y6E0 443 aa15.37■□□□□ 0.05
APOC1-208ENST00000592535 E9PMD0 336 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 NPTXRO95502 500 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 POMCP01189 267 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 KRT79Q5XKE5 535 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 LARP1BQ659C4 914 aaKnown RBP15.36■□□□□ 0.05
APOC1-208ENST00000592535 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 ZBTB8OSQ8IWT0 167 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 IGSF21Q96ID5 467 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 MMTAG2Q9BU76 263 aaKnown RBP15.36■□□□□ 0.05
APOC1-208ENST00000592535 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 FZD8Q9H461 694 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 NXF3Q9H4D5 531 aaKnown RBP15.36■□□□□ 0.05
APOC1-208ENST00000592535 EPHX3Q9H6B9 360 aa15.36■□□□□ 0.05
APOC1-208ENST00000592535 PRMT7Q9NVM4 692 aaPredicted RBP15.36■□□□□ 0.05
APOC1-208ENST00000592535 KANSL3Q9P2N6 904 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms