RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FGFBP2Q9BYJ0 223 aa20.89■□□□□ 0.94
CLPTM1-209ENST00000588855 TMEM134Q9H6X4 195 aa20.89■□□□□ 0.94
CLPTM1-209ENST00000588855 MRPL44Q9H9J2 332 aaKnown RBP20.89■□□□□ 0.94
CLPTM1-209ENST00000588855 OLFML3Q9NRN5 406 aa20.89■□□□□ 0.94
CLPTM1-209ENST00000588855 USP20Q9Y2K6 914 aa20.89■□□□□ 0.94
CLPTM1-209ENST00000588855 PVALEFA0A1B0GWK0 134 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 K7ERI5 159 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 ARF4P18085 180 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 WDR5P61964 334 aaKnown RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 PNOCQ13519 176 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 PCBP1Q15365 356 aaKnown RBP eCLIP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 CPB2Q96IY4 423 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 RNPC3Q96LT9 517 aaKnown RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 PRIMPOLQ96LW4 560 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 ADAM2Q99965 735 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 TSPYL2Q9H2G4 693 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 LAMA3Q16787 3333 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 CNTNAP2Q9UHC6 1331 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 H0YCG3 227 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 ACKR2O00590 384 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 HOXA11P31270 313 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 MCM4P33991 863 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 CASP5P51878 434 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 DEFB103AP81534 67 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 EHHADHQ08426 723 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 RASIP1Q5U651 963 aa20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 ERCC4Q92889 916 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-209ENST00000588855 TTC3P53804 2025 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 ENPP3O14638 875 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 EFCAB14O75071 495 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 RPN1P04843 607 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 ZSCAN20P17040 1043 aaPredicted RBP20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 PRPF4BQ13523 1007 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 KMT5BQ4FZB7 885 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 ZC2HC1CQ53FD0 456 aaPredicted RBP20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 ZNF720Q7Z2F6 126 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 TDHQ8IZJ6 230 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 GLIS3Q8NEA6 775 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 GPT2Q8TD30 523 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 KCNN1Q92952 543 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 ST6GALNAC4Q9H4F1 302 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 CHST12Q9NRB3 414 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 RGS18Q9NS28 235 aa20.87■□□□□ 0.93
CLPTM1-209ENST00000588855 PPP1R37O75864 691 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 GCNT3O95395 438 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 MYBP10242 640 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 AXLP30530 894 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 KCNJ6P48051 423 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 GTF2BQ00403 316 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 STRN3Q13033 797 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 FAM26FQ5R3K3 315 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 NT5DC1Q5TFE4 455 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 TWF2Q6IBS0 349 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 CDR2LQ86X02 465 aaPredicted RBP20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 STRA6Q9BX79 667 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 EXOC1Q9NV70 894 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 COLQQ9Y215 455 aaPredicted RBP20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 GBF1Q92538 1859 aa20.86■□□□□ 0.93
CLPTM1-209ENST00000588855 IBSPP21815 317 aaPredicted RBP20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 TMEM132AQ24JP5 1023 aa20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 NOTUMQ6P988 496 aa20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 ELOA2Q8IYF1 753 aaPredicted RBP20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 MYOCDQ8IZQ8 938 aa20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 HOOK1Q9UJC3 728 aaKnown RBP20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 TBX20Q9UMR3 447 aa20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 SLC4A7Q9Y6M7 1214 aa20.85■□□□□ 0.93
CLPTM1-209ENST00000588855 C9IYK1 514 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 SCP2P22307 547 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 NCBP1Q09161 790 aaKnown RBP20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 UBXN11Q5T124 520 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 FAM43BQ6ZT52 329 aaPredicted RBP20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 TMCO2Q7Z6W1 182 aaPredicted RBP20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 TARS2Q9BW92 718 aaKnown RBP20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 MRPL4Q9BYD3 311 aaKnown RBP20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 PDZD7Q9H5P4 517 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 SLC39A2Q9NP94 309 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 C1orf112Q9NSG2 853 aa20.84■□□□□ 0.93
CLPTM1-209ENST00000588855 A0A1B0GUA9 196 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 AMHP03971 560 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 KCNA1Q09470 495 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 EEF1DP3Q658K8 133 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 SLC24A5Q71RS6 500 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 MAP4K3Q8IVH8 894 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 CCDC51Q96ER9 411 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 ACO2Q99798 780 aaKnown RBP20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 EIF2AQ9BY44 585 aaKnown RBP20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 PCDHA5Q9Y5H7 936 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 TRIOBPQ9H2D6 2365 aa20.83■□□□□ 0.93
CLPTM1-209ENST00000588855 PRPF6O94906 941 aaKnown RBP20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 RHOBTB3O94955 611 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 ABCD1P33897 745 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 SARSP49591 514 aaKnown RBP20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 CAMK4Q16566 473 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 L1TD1Q5T7N2 865 aaKnown RBP20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 ATF7IP2Q5U623 682 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 KIAA0895Q8NCT3 520 aa20.83■□□□□ 0.92
CLPTM1-209ENST00000588855 SPATA20Q8TB22 786 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms